Gene Ddes_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2084 
Symbol 
ID7285800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2509055 
End bp2510065 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content57% 
IMG OID643582906 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_002480658 
Protein GI220905346 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.364681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAGA CCAATATCCT GCTTGAAGCC GGCACCAATG AGCTGGAAGT GGTAGAATTT 
TATCTTGACG AATTCGTTCC ACCTTCCACC GATGCGCCCC AGACGGACGA AAACGGCCAG 
CCCGTGGCCC CGGCCTCATA CCGGGGGTAT TATGGCGTCA ACGTAGCCAA GGTGCTGGAG 
ATCATCCGCA TGCCCAAGGT TACGGAACTG CCCGAAGTCC AGCACCCCAG TGTACTCGGG 
GCTTTTAACC TGCGCTCCCG CATCATCCCC CTGGTGGACC TTGCCATGTG GCTCGGCAAA 
ACGCATCCGG CCAATGAAGA GCAGCCCAAA ACCATTGTGA CGGAATTCAA CAATGTCACC 
ACGGCTTTTA TGGTATCCGG CGTCAACCGT ATCCACCGCA TAAGCTGGGA GCAGGTTGAG 
CCGCCGAACA AATATGTGGC CGCCGTCTCC AACAATACGG TCATCGGCGT GGTCAAGCTT 
GAAGACCGCA TCATTTTTCT GCTGGACCTG GAAAAGGTGG TGGCCAACCT CAATCCCAAG 
CTGGGCCTGC GCCTGGACGA CCTTGGCGAA GACTGGACCA ACAAGGGCTA CCGTGCCCTT 
GTGGCTGACG ACTCTGCCCT GGTACGCGAA ATGCTGCGTG ATCTTATGGA AAAGGCAGGC 
TTTACCGTTG AGGTTGTTTC CAACGGCCGC GCCGCATGGG AACGGCTTGA AGATATCAAG 
CAGCGCTGTG AAGACAGCGG CAGACCCGTT TCGGACTTTG TGCATGTGAT GGTGTCGGAC 
ATTGAAATGC CAGTGATGGA CGGTCTTAAC CTCACCCACC GCATCAAGAC CGACCATGTG 
CTCAACAAGC TGCCCGTGAT ACTGTTTTCT TCGCTCATCA CGGACAAGCT GCGCCACAAG 
GGCGAAAGCG TGGGCGCGGA CGACCAGATA TCCAAGCCGG AAGTCACCCA GCTTGCCCGC 
CGCGCCATGG CCCTTATCAG GGCATGCGAA GAAGAGGCCG CAGCCCGTTA G
 
Protein sequence
MSQTNILLEA GTNELEVVEF YLDEFVPPST DAPQTDENGQ PVAPASYRGY YGVNVAKVLE 
IIRMPKVTEL PEVQHPSVLG AFNLRSRIIP LVDLAMWLGK THPANEEQPK TIVTEFNNVT 
TAFMVSGVNR IHRISWEQVE PPNKYVAAVS NNTVIGVVKL EDRIIFLLDL EKVVANLNPK 
LGLRLDDLGE DWTNKGYRAL VADDSALVRE MLRDLMEKAG FTVEVVSNGR AAWERLEDIK 
QRCEDSGRPV SDFVHVMVSD IEMPVMDGLN LTHRIKTDHV LNKLPVILFS SLITDKLRHK 
GESVGADDQI SKPEVTQLAR RAMALIRACE EEAAAR