Gene Ddes_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2023 
SymbolrpsR 
ID7285739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2436262 
End bp2436525 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content59% 
IMG OID643582845 
Product30S ribosomal protein S18 
Protein accessionYP_002480597 
Protein GI220905285 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0238] Ribosomal protein S18 
TIGRFAM ID[TIGR00165] ribosomal protein S18 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.344457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTCA AGAAAAAATT TGCCCCGCGC CGCAAGTTCT GCCGTTTCTG CGCAGACAAG 
GACCTGCCCC TGAACTACAA GCGCCCTGAC ATCCTGCGTG ATTTCATCAC CGAGCGCGGC
AAGATCATTG CCCGCCGCAT CACCGGTACC TGCGCGCATC ACCAGCGCCT GCTGACCCGC
GAAATCAAGC GCGCCCGTCA GATGGCCCTG CTCATTTACA CCGCGACGCA CGATTCCGGC
GTCCAGAAAA AGAGCAGCAT CTAA
 
Protein sequence
MAFKKKFAPR RKFCRFCADK DLPLNYKRPD ILRDFITERG KIIARRITGT CAHHQRLLTR 
EIKRARQMAL LIYTATHDSG VQKKSSI