Gene Ddes_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2012 
Symbol 
ID7285728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2425297 
End bp2426505 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content58% 
IMG OID643582834 
Productbeta-lactamase domain protein 
Protein accessionYP_002480586 
Protein GI220905274 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000125952 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCTG TTGAAATCAA AAAAGACATC TACTGGATAG GCTATGTAGA CTACGACCAC 
CGGGACTTCC ACGGCTACTC CCGTTCCCCG GACGGCTCCA CCTATAACGC CTACCTCATC
AAAGACGAAA AAAATGTCCT TATGGACACG GTATCCTCAG GCTGCGAAGG CACGCTTCTG
TGCCGCATGG CCAAGGTTCT GGAACCAGAA AAGGTCGACT ATATCGTCTG CAACCATATG
GAGCTTGACC ACGCGGGCGC CCTTGAAGCC ATCGTGGAAC GCTGCAAGCC CGAAAAAATT
TTCGTGTCGC AGGCGGGCCT CAAGTCCATG GCAGGTTATT TTTCCTGCAA GGACTGGCCC
GTGCAGGCCG TCAAAAGCGG CGACAGCATC AGCATAGGCA AGCGCACCAT AGTTTTTCAG
GAAACGCGCA TGCTGCACTG GCCCGACAGC ATGGTCTCGT ATATTCCTGA AGAAAGGCTG
CTCATCAGCA ATGACATCTT CGGCCAGAAT ATCGCCAGCT CCGCGCGTTT TGTAGACGAC
TTTGATGATG ACGGCGAATA TCTGCGCCGC GTCAAGGAAT ACTACTATAA TATCGTGCTG
CCCTACTCGC CCATGGTGCT CAAGGCCCTG CCCATCGTGG AGCAGCTGGA CATCGACATG
ATTGCCCCCG ACCACGGCCT CATTCACCGT GGCGAAAAGG CCGTGCGCCG CATTATCGAT
CTGTACCGCA CCATGGCCGA ACAAAAGCCG CAGCAGCGCG CCCTCATTTT TTACGACACC
ATGTGGCAGT CCACTGAATC CATGGCCTAT GCCGCATGCA GCGGGCTGGA AGAAAACGGC
GTGCCCACGC GCATCATGTC GGTCAAAAGC AATCACCACA GCGCCATCAT GACCGAACTG
GCCGACTGCG GCGCGGTACT GGCCGGTTCG CCCACCCACA ACAATACGGT GCTGCCCCTG
GTCGCCGCCC AGCTCACCTA CATGAAGGGC CTGCGCCCCC TGAACCGCGT AGGGGCCGCC
TTCGGCTCGT TCGGCTGGTC CGGCGAAGCG CCCAGGCAGC TGCACGAACA CCTGGCAGGC
ATGCACATGG TCATGCCCGT GGAACCGGTC AAGTGCAACT GGCGGCCCGA CCGCGATGTG
CTCAAGGCCT GCCACGACAT GGGCAAAACT GTGGCCGAAA CACTGAAAAA GAAGTGCCAG
GAAGGATAG
 
Protein sequence
MQPVEIKKDI YWIGYVDYDH RDFHGYSRSP DGSTYNAYLI KDEKNVLMDT VSSGCEGTLL 
CRMAKVLEPE KVDYIVCNHM ELDHAGALEA IVERCKPEKI FVSQAGLKSM AGYFSCKDWP
VQAVKSGDSI SIGKRTIVFQ ETRMLHWPDS MVSYIPEERL LISNDIFGQN IASSARFVDD
FDDDGEYLRR VKEYYYNIVL PYSPMVLKAL PIVEQLDIDM IAPDHGLIHR GEKAVRRIID
LYRTMAEQKP QQRALIFYDT MWQSTESMAY AACSGLEENG VPTRIMSVKS NHHSAIMTEL
ADCGAVLAGS PTHNNTVLPL VAAQLTYMKG LRPLNRVGAA FGSFGWSGEA PRQLHEHLAG
MHMVMPVEPV KCNWRPDRDV LKACHDMGKT VAETLKKKCQ EG