Gene Ddes_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1942 
Symbol 
ID7285658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2338080 
End bp2338958 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content60% 
IMG OID643582764 
Productdihydrodipicolinate synthase 
Protein accessionYP_002480516 
Protein GI220905204 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTTT CAGGTGCACT GACAGCGCTA GTCACCCCGT TCAAGGATGA GGCCCTGGAC 
GAGGAAGCCT ACCGGAATTT CATCGAATTC CAGATTACGG AAGGCATCCA CGGCCTGGTA
CCCTGCGGCA CCACCGGTGA ATCCGCCACG CTCAGCCACG AAGAGCACGA AAGGGTTATT
GAAATCTGCA TTGATCAGGC CAGGGGCCGC GTACCCGTGC TGGCCGGGGC CGGGTCCAAC
AACACGGCAG AGGCCGTGCG CCTGACCCGC TTTGCCCAGA AAGCCGGGGC AAACGGGGCC
CTGCTTATCA CCCCCTACTA CAACAAACCC ACGCAGGAAG GCCTGTATCG CCATTACAAG
GCCATAGCCG AAGCCGTGGA AATGCCTCTT GTTCCCTACA ATGTGCCTGG CCGCACGGGC
TGCAACCTGC TGCCCGAAAC CCTGGCCCGC CTGGCCAAAG AATTTTCACA CATTGTAGGC
GTCAAGGAAG CTACCGGCGA CATGGCCCAG GGCAGCAAAA CCCTGTCGAG CTGTCCCGCG
GGCTTCAGCG TGCTTTCCGG CGACGACTTC ACTGCCCTGC CGCTTATGGC GCTGGGCGGC
AAAGGGGTCA TCTCCGTTAC GTCCAATATC GTGCCTGGCC GCATGGCCGC CATGTGCAAC
GCCTTTAATA AGGGCGATGT GGCCGAAGCC GCGCGCATCC ATCACGAACT TTTCCCCCTG
CATGAAGCCA TGTTCTTTGA GAGCAATCCC ATTCCGGCCA AAACGGCCCT GAGCCTTATG
GGCAAAATGG AAGCCGGGTT GCGCCTGCCG CTCTGCCCCA TGAGCGCGGC AGCCAAAGAA
AAACTCGCAG GTGTGCTGCG CGGATTACAG CTTATTTAA
 
Protein sequence
MLFSGALTAL VTPFKDEALD EEAYRNFIEF QITEGIHGLV PCGTTGESAT LSHEEHERVI 
EICIDQARGR VPVLAGAGSN NTAEAVRLTR FAQKAGANGA LLITPYYNKP TQEGLYRHYK
AIAEAVEMPL VPYNVPGRTG CNLLPETLAR LAKEFSHIVG VKEATGDMAQ GSKTLSSCPA
GFSVLSGDDF TALPLMALGG KGVISVTSNI VPGRMAAMCN AFNKGDVAEA ARIHHELFPL
HEAMFFESNP IPAKTALSLM GKMEAGLRLP LCPMSAAAKE KLAGVLRGLQ LI