| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1898 |
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| Symbol | |
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| ID | 7285613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 2287677 |
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| End bp | 2288558 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643582719 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_002480472 |
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| Protein GI | 220905160 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGG GCACCATTCG CCTGAAGACA GGCCTTGCAG AAATGCTGAA AGGCGGCGTG
ATCATGGACG TCACCACTCC CGAACAGGCT AAAATCGCTG AAGAAGCTGG CGCTTGCGCC
GTAATGGCTC TGGAGCGTGT GCCTGCGGAC ATTCGCGCTG CCGGTGGCGT GGCCCGCATG
GCTGATCCCA CCATTGTTAA AAAAATCATG GAAGTAGCCA CCATTCCCGT TATGGCCAAG
GCGCGCATCG GCCACTTTGT GGAAGCGCGT ATTCTTGAGT CTATGGGGGT GGATTATATT
GACGAGAGCG AAGTGCTCAC CCCCGCTGAC GACAAGTATC ATATCGACAA GCGCGATTTC
ACCGTGCCTT TTGTCTGCGG CTGCCGCAAT CTGGGCGAAG CCCTGCGCCG TATCGCCGAA
GGCGCGGCCA TGATTCGCAC CAAGGGCGAG CCTGGAACCG GCAACGTGGT TGAAGCCGTG
CGCCATTGCC GTCAGGTGAT GGACGAAGTG CGCATGCTCT GCGCCCTGCC CGAAGCCGAG
GTGCCCAACT TTGCCAAAGA AATGGGCGCT CCTCTTGAAC TGTGCCTGCT CGTACGCAAA
GAAGGCCGCC TGCCCGTGGT CAACTTTGCC GCCGGCGGCA TCGCCACCCC GGCTGACGCC
GCCATGATGA TGCATCTTGG TTGCGACGGC GTATTTGTGG GTTCCGGCAT TTTCAAGTCC
GGCGACCCGG CCAAGCGCGC CAGGGCCATT GTGCAGGCCG TGACCAACTA CAAGGATTTC
GCCCTGCTGG CCGAAATCTC CCGTGATCTT GGCGAACCTA TGGTGGGTAT TGAAATTTCC
ACCATTCCCT CTGGTGAGCG CATGCAGGAG CGGGGCTGGT AG
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| Protein sequence | MEQGTIRLKT GLAEMLKGGV IMDVTTPEQA KIAEEAGACA VMALERVPAD IRAAGGVARM
ADPTIVKKIM EVATIPVMAK ARIGHFVEAR ILESMGVDYI DESEVLTPAD DKYHIDKRDF
TVPFVCGCRN LGEALRRIAE GAAMIRTKGE PGTGNVVEAV RHCRQVMDEV RMLCALPEAE
VPNFAKEMGA PLELCLLVRK EGRLPVVNFA AGGIATPADA AMMMHLGCDG VFVGSGIFKS
GDPAKRARAI VQAVTNYKDF ALLAEISRDL GEPMVGIEIS TIPSGERMQE RGW
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