| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1868 |
|---|
| Symbol | |
|---|
| ID | 7285583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2250896 |
|---|
| End bp | 2251792 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643582689 |
|---|
| Product | protein of unknown function DUF52 |
|---|
| Protein accession | YP_002480442 |
|---|
| Protein GI | 220905130 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1355] Predicted dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATAC GACACCCCAT CGCGGCGGGA CGTTTTTATC CTGCTGACGC CGAACAGTTG
AAAAAAGAAA TCCGCATGTG GCTTATGTCC GGGGGTGTGC CTGAAAACCT TGTCCCCGGT
GAAATACCGC GTGAGGCAAA CGCACGCCTG CTGGGGCTTA TGCTGCCTCA CGCCGGTTAT
GTCTACTGCG GGCGCGTTAT TGGCGGCACA CTGACCAGCG CCTGGGACGG CTCCACAGCC
GGAGCCAATC TGCCCGAACG GCTTTTTATC CTGTGCCCGA ACCATACCGG ACAGGGGCGA
GCGCTGGGCG TCTGGACCGG CGGGCACTGG CTGACCCCCC TGGGGCCGGT TGTGGTGGAC
GAGAAGCTTG GACAGGCGCT GGTGCAGGCT GCCGGAGGTT TTTTTGAAGA CGAGCTTTGC
CATGTGAGCG AGCACTCCAT TGAGGTATTG CTGCCGTTTT TGCAAAGCCT GCCCTTGCCC
CGCGAGTCCG GGCGCAGCAT TGTACCCGTA TGTGTGGGTA CGCGCAGCCC GGATGCCCTG
CGTGCAGCGG GCCTTGCCCT GGCGCGGGTC ATACAGGCAT TCGAGGCGGA GGGGCACAGT
GTCGGCATCG TTGTCAGTTC TGACCTGAAC CATTATCAGA GCCAGGAACT GACCCTGCAC
AAAGATGCCC TCGCCCTTGC CCAGGTGCTT GCCTGCGATC CCGATGGGCT GCTGACCGTG
GTGGAGCGTG AAAGCATCAC CATGTGCGGT GCAGGGGCCA TGGCACTGGC CCTGTTTACA
GCGCACGCCA TGGGCAGCCC TTGGGCCGAG CTGACGTTGT ACGATACCTC GGCGGCCGCA
TCCGGCGATA CCAGCCGGGT GGTCGGCTAC GCGGGGCTGC GTTTCGGGCT GGCGTAA
|
|---|
| Protein sequence | MSIRHPIAAG RFYPADAEQL KKEIRMWLMS GGVPENLVPG EIPREANARL LGLMLPHAGY
VYCGRVIGGT LTSAWDGSTA GANLPERLFI LCPNHTGQGR ALGVWTGGHW LTPLGPVVVD
EKLGQALVQA AGGFFEDELC HVSEHSIEVL LPFLQSLPLP RESGRSIVPV CVGTRSPDAL
RAAGLALARV IQAFEAEGHS VGIVVSSDLN HYQSQELTLH KDALALAQVL ACDPDGLLTV
VERESITMCG AGAMALALFT AHAMGSPWAE LTLYDTSAAA SGDTSRVVGY AGLRFGLA
|
|---|
| |