Gene Ddes_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1860 
Symbol 
ID7285575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2244362 
End bp2245528 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content63% 
IMG OID643582681 
ProductGlycerate kinase 
Protein accessionYP_002480434 
Protein GI220905122 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1929] Glycerate kinase 
TIGRFAM ID[TIGR00045] glycerate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.817432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG TCATTGCGCC GGATTCATAC AAGGAATGCC TGTCGGCCCT GCAAGTCGCC 
ACACTTATAG AGTCGGGCTT TCGCGAGATA TTTCCCGGGG CCGACTACAT CAAGGTTCCC 
GTGGCTGACG GCGGCGAAGG CACGGTGGAA GCTATGGTGG AAGCAACCCG GGGAACCATT 
GTGCCGGTGA CGGTCAGGGG CCCCCTCGGC GAAGCCGTGG AAGCTTTTTA CGGCCTTACG 
GGCGATGGCG GCACGGCCGT CATTGAAATG GCCACGGCCA GCGGCCTGGG GCTTGTGCCG 
CCGGAACAGC GCAATCCCCT GCGCACCACA AGCTACGGCA CAGGCGAACT CATACGCTCG 
GCTCTGGATG CCGGGGCGCG CAGATTCATC CTCGGCATCG GCGGCAGTGC CACCAATGAG 
GGCGGCGCAG GCATGCTTCA GGCGCTCGGT GTGCGGCTGC TCGATAAGCA GGGCCAAGAA 
ATCGAACCTA CAGGACTCGG ACTCGGCAAG CTTGCGCGCA TAGACCTGTC CGGTATTGAT 
CCACGCCTGA AGGACACCGT CATTGACGTG GCCTGTGACG TAGATAACCC CCTTTGCGGC 
CCGCGCGGCG CATCGGCCAT TTTTGGCCCG CAAAAAGGTG CCACACCCGA AATGGTACAG 
CAGCTTGACG GCTACCTGCA AAATTTCGCA GCCATAACCC TCCGTGACCT TGGCATTGAT 
ATGGCCCATA TCTCCGGTGC CGGAGCCGCC GGTGGCATGG GCGGCGGCAT GTACGCCTTT 
TTGCGCGGGC GCCTGCGTCC GGGCAGCGAA ATTGTCACCG AAGCCGTGGG GCTTGACGCG 
CTTGTCAGGG ATGCGGACCT TGTCATCACC GGCGAAGGCC GTATTGACGG GCAGACAGCT 
TTTGGCAAGG CCCCGGTGGG CGTGGCCCGC GTGGCAAAGC GCTACGGCAG GCCCGTAATC 
GCCATCGGCG GTTCCCTGCG CCATGACGCC CATGTGGTGC ATGAGCACGG CATTGACGCC 
ATTTTCAGCG TACTCTACCG CCCATGCAGC ATTGGCGAAG CCCTGGCTGA AGGCACGGAC 
AATCTGCGCA CGGCTGCGCG CAATGTTGCC GCCGCCATAT CCGTGGGCGG CGGGCTTGGC 
TCTGTGGCAA CGCGGGCGGG CAGATGA
 
Protein sequence
MKIVIAPDSY KECLSALQVA TLIESGFREI FPGADYIKVP VADGGEGTVE AMVEATRGTI 
VPVTVRGPLG EAVEAFYGLT GDGGTAVIEM ATASGLGLVP PEQRNPLRTT SYGTGELIRS 
ALDAGARRFI LGIGGSATNE GGAGMLQALG VRLLDKQGQE IEPTGLGLGK LARIDLSGID 
PRLKDTVIDV ACDVDNPLCG PRGASAIFGP QKGATPEMVQ QLDGYLQNFA AITLRDLGID 
MAHISGAGAA GGMGGGMYAF LRGRLRPGSE IVTEAVGLDA LVRDADLVIT GEGRIDGQTA 
FGKAPVGVAR VAKRYGRPVI AIGGSLRHDA HVVHEHGIDA IFSVLYRPCS IGEALAEGTD 
NLRTAARNVA AAISVGGGLG SVATRAGR