| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1826 |
|---|
| Symbol | |
|---|
| ID | 7285539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 2202054 |
|---|
| End bp | 2203604 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643582646 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_002480401 |
|---|
| Protein GI | 220905089 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.698968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAC AAAAATATCT TCTTGCCGTT CTGGCGCTGC TGGCTCTTTG CGGCTCCGCC
CATGCCGCCG ACACTGTACA ACCCTATGCG GCCAACCTTT TTCAGGGCAA CTTTGCCCAG
AACAAGGAAG GCGCGGTCAT TGCGCCCGGC GACCGTGTGG TGGTGCGCCT GTGGGGCGGC
GACCTCAATG TGGACCGCAC CCTCGCAGTA GGGCCGGACG GGCATATGAA CCTGCCCGAA
GTGGGCGACA TGCCCGTGGC CGGCCTGGCC TACGACAAGC TGGCCGATGC CCTGCGCAGC
AAACTGGCCG CCAACGGGCA TGCTGATGTG CAGATTTACG CAGCGCCACT GGACGCGCGC
CCCGTATCCG TTTTTGTAAC GGGCGGCGTA AGCCGTCCGG GACGCTATAC CGGCGGCCCC
AGCGACCCCC TGCTCAGCTT TCTGGACAAG GCGGGCGGGC TTGACCCGGT GCGCGGCAGC
TACCGCGACA TCCGCCTCAT GCGTGACGGC ACAACCGTCA CCAGCCTCGA CCTCTATCCC
TTTGCCCGCA AGGGCGTGCT GCCCGCCGTG CGCGTGCAGG AAGGCGACAC CCTTGTGGTG
GGCGAAAAAG GCCCCACCAT CACGGCCACC GGGGCGGTCC GCAATCCCGC GCTCTTTGAG
TTTCCCAAGG GGCAGGCCAC CGGAACCGCA CTTATGGACC TGGCCGACCC CGAGGGGCGC
GCTTCGCACA TAGCCCTGAA CGGAACCCGC AACGGCGCGC CGTACAGCAC CTACCTGCCC
CTCAAGGATC TGCGTGCCCT GCAGCTTGAA GACGGCGACA AGGTGCAGTT TATCGCCGAT
GCGCCGGGCA ATACCATCAT GATTGAAGTG CAGGGAGCGG TGCGCGGGGC TTCACGCTTT
CCCGTGCGTC AGGGCGCGCG CCTTCGGGAC GTGAAAAACT TCATCGCCGT GGAACCGGAA
CGCGCCAACC TTGAAGCCAT GTACATCAAG CGCAAAAGCG TGGCTGCCAG ACAAAAAAAG
GCCATTGCCG ATTCCCTGCG CCGTCTTGAA GAAACAGCCC TTACCGCCTC GTCGGCCAGT
ACCGAGGAAG CGCAGATACG CGCCAAGGAA GCCGAAATGG TGTCCAAGTT CGTGGAGCGC
GCCAAGGCTG TCGAACCGGA AGGAGTGGTG GTGCTGGACG GCGGCCCGGA CAAGGCAGAT
CTGAGCCTTG AAGAGGGCGA TGTCATCGTT ATCCCCACCA AGAGCGATGT GGTACTGGTA
AGCGGCGAGG TTATGGTTCC GCAGGCCATG CTCTGGGGCA AAAAGAAGGA TGCCGACGAC
TATATCAAGG GTGCAGGCGG CTTGACCAGC CGCGCAGACA GCGGCAAGAT TCTTGTCATG
CACCAGAACG GTTCTGTAAC TCAGGGCGGG GGCGACATCT CCCCCGGCGA CCAGATACTG
GTGCTGCCCA AGGTGGAATC CAAAAGCATG CAGGCCGTCA AGGACATCTC GCAGGTGCTC
ATGCAGGTGG CGGTATCTGC CCGGGTGCTG CTGGGGCTGC CGACCCTGTA A
|
|---|
| Protein sequence | MLQQKYLLAV LALLALCGSA HAADTVQPYA ANLFQGNFAQ NKEGAVIAPG DRVVVRLWGG
DLNVDRTLAV GPDGHMNLPE VGDMPVAGLA YDKLADALRS KLAANGHADV QIYAAPLDAR
PVSVFVTGGV SRPGRYTGGP SDPLLSFLDK AGGLDPVRGS YRDIRLMRDG TTVTSLDLYP
FARKGVLPAV RVQEGDTLVV GEKGPTITAT GAVRNPALFE FPKGQATGTA LMDLADPEGR
ASHIALNGTR NGAPYSTYLP LKDLRALQLE DGDKVQFIAD APGNTIMIEV QGAVRGASRF
PVRQGARLRD VKNFIAVEPE RANLEAMYIK RKSVAARQKK AIADSLRRLE ETALTASSAS
TEEAQIRAKE AEMVSKFVER AKAVEPEGVV VLDGGPDKAD LSLEEGDVIV IPTKSDVVLV
SGEVMVPQAM LWGKKKDADD YIKGAGGLTS RADSGKILVM HQNGSVTQGG GDISPGDQIL
VLPKVESKSM QAVKDISQVL MQVAVSARVL LGLPTL
|
|---|
| |