Gene Ddes_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1808 
Symbol 
ID7285521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2182791 
End bp2184197 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content58% 
IMG OID643582628 
ProductSec-independent protein translocase, TatC subunit 
Protein accessionYP_002480383 
Protein GI220905071 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAG AAAAAAAAGT TCCACTGGAG CAGGCCGCGA CAAGCGTTTC TGACGCCTCC 
CGTTCCGAAG AATCCGGCGC CGGGCCGGAA GCAGCCGCTG CACTGTCCGT CATCGGCAAC
GTGAATCTTG AGGCCGCCAG CCATCTGGCG GCCTCTGCCG CACCAAACGG CGGCCAGACG
GAAAACAGGG CGAAAGACAC GCCCGGTAAC AGCACGCGCG CCACCCCCCC CCCGACAGAA
GACGGCATAA AAAGCCATGT CGCTGCCGGG GATGCGCAGG CCGCCCCTGA CGGCAACGAA
GCTGCCACCG TGAAAAGTCC GACACAGAAT ACACAGCCGG ATTCGGCTGA AAATGCCGAC
ACGACTACAG GCACACAGAC CTCGGGTAAC ACGGCATCCG CCGAAGCTGC GGCCGAAACT
TCTGGCAAAG CTGCCGCCGC GCCCGCCGTT GCCGCTGGTT CGGGCGGGCA GCCGCCCCTG
CCCCCGGCCA GTCCGTTTCC GCCCAACGCG TCGGAAGAGT CTGCCCCCGT TCCGGCGGTT
TCCGGCGGTC AGCCCCCAGC CACGCCCGAT GAGGACGATG ACGAAGAAGA AGGCGGTCCG
GACAAGCCCA TGGGCCTTAT GGACCACCTT GGCGAACTGC GCATGCGCCT TGTGCGCTGC
TGTATCGCTG TGATCGTGGG CTTTTTTGCC TGCTGGGCCG TGGTGGATCC CATTTTTGAC
GTGCTGGTCA ATCCCCTTCT GGCCGTTTTG CCCAAGGGTT CACACGCCAT TTACACCACC
TTGCCCGAAG GATTTTTCAC CCGCATGCAC ATTGCCTTTG TGGCGGGTGT TTTTGTATCC
AGCCCGGTGA TTTTCTACCA GATATGGTCA TTCATCGCGC CCGGCCTGTA TGAAGAAGAA
AAAAAATACA TCATCCCCAT TGCGATAATG TCTGCCCTGT TCTTCATCTG CGGCGGCGCG
TTCTGTTATT TTGTGGTTTT TCCCTATGCC TTCAGTTTCT TTGTGAGCTT TGCCACCGAA
GAAATCGTGG CCATGCCCAA GGTGAGCGAC TATCTGAGTT TTGTGCTCAA GCTCATTCTG
GCCTTCGGCA TTATTTTTGA AATGCCGCTT TTTGCCTTCT TTCTCGCACG CATGGGCGTT
GTCACCGCTG CCATGATGCG GCAGGCGCGG CGTTATGCGA TTCTGGGCAT CTTTATTGTG
GCGGCCATTC TTACCCCGCC CGATGTGGTC TCACAACTGC TCATGGCCTG CCCCATGCTT
ATCCTGTATG AAATAAGCAT CTGGGTGGCG GCAGCCTTTG GCCGCAAACC CAAAACTGAA
AAAGATGCCG ATGACGGCGG GCAGGAAAAG ACAGACGCAG ACGCTGCATC GGATGCAAAA
ACCGCCAACG CCTCGGAGAA AGCATGA
 
Protein sequence
MTEEKKVPLE QAATSVSDAS RSEESGAGPE AAAALSVIGN VNLEAASHLA ASAAPNGGQT 
ENRAKDTPGN STRATPPPTE DGIKSHVAAG DAQAAPDGNE AATVKSPTQN TQPDSAENAD
TTTGTQTSGN TASAEAAAET SGKAAAAPAV AAGSGGQPPL PPASPFPPNA SEESAPVPAV
SGGQPPATPD EDDDEEEGGP DKPMGLMDHL GELRMRLVRC CIAVIVGFFA CWAVVDPIFD
VLVNPLLAVL PKGSHAIYTT LPEGFFTRMH IAFVAGVFVS SPVIFYQIWS FIAPGLYEEE
KKYIIPIAIM SALFFICGGA FCYFVVFPYA FSFFVSFATE EIVAMPKVSD YLSFVLKLIL
AFGIIFEMPL FAFFLARMGV VTAAMMRQAR RYAILGIFIV AAILTPPDVV SQLLMACPML
ILYEISIWVA AAFGRKPKTE KDADDGGQEK TDADAASDAK TANASEKA