| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1807 |
|---|
| Symbol | |
|---|
| ID | 7285520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 2182213 |
|---|
| End bp | 2182794 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643582627 |
|---|
| Product | twin-arginine translocation protein, TatB subunit |
|---|
| Protein accession | YP_002480382 |
|---|
| Protein GI | 220905070 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1826] Sec-independent protein secretion pathway components |
|---|
| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB
[TIGR01411] twin arginine-targeting protein translocase, TatA/E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.988739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGTA TAGGCAGCAC GGAACTTCTG GTCATCCTTG TGGTGGCCCT GATTGTGTTG
GGTCCCAAGA GCCTTGCCAA TGTGTCGCGC ACGCTGGGCA AGGCCATGGG CGAATTCCGC
CGGGTTTCCA CCGACTTCCA GCGCACCCTC AATGCCGAGG CTGAAGAGGA AGAACAGAAA
AAACGCAAAA AGGAAGCCGC CAAAGCCGCC AGAGAAGCCG CCAGGGCCGA AGCCGATGGG
ACGCAGGCGG CGCAGCAAAG CACAGAGCAG GCAGCGGAGC AGCCTGAACC CCGTGCCGCG
CAGGGTATGA CGGCAGCCAA GGATGCCCCT GCATCCGAAG CTGTGCTTGA TACCACAGTT
GTCCAGCCCC CTTCAGAGGC TCCGCAGGCT GAAAGCGTCC CCCAGGCCGC CCCTGCTGCT
GAAGCCGTTC CGGAAACTGA CACCACAGCT TCCGGCGTGC CGGTTCCTCC TGAAGGCAGC
CCCCTGGCTG AAGCCCTGGC CCGAACTGAA GCTGAAGCGC GCGCTGCAGA AGCCCGCATT
ACTCCGTCCA CCCCTGCTTC TGAAAACGGC GGCAAGGCAT GA
|
|---|
| Protein sequence | MFGIGSTELL VILVVALIVL GPKSLANVSR TLGKAMGEFR RVSTDFQRTL NAEAEEEEQK
KRKKEAAKAA REAARAEADG TQAAQQSTEQ AAEQPEPRAA QGMTAAKDAP ASEAVLDTTV
VQPPSEAPQA ESVPQAAPAA EAVPETDTTA SGVPVPPEGS PLAEALARTE AEARAAEARI
TPSTPASENG GKA
|
|---|
| |