Gene Ddes_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1776 
Symbol 
ID7285489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp2146521 
End bp2147180 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content63% 
IMG OID643582596 
ProductABC transporter related 
Protein accessionYP_002480351 
Protein GI220905039 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.680063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGACGA TACAGTATAA GGGCCGCAAT CTGGTACAGA TGTATGGCGG CCGCATTGCC 
CTGAACCTGC CCTGCCTTGA GGTTGAAAAG GGCGAAACCC TGGCGCTCAC CGGGCCAAAC 
GGCTGCGGCA AGTCCACGCT GCTCCGCCTG TTGGCTTTTC TGGAGCGTCC GGCATCGGGA 
ACACTGCGTT ATGCCGGCAA CGCCGCAGCA AGTCGGCAGG AGGTCACGCT GCTGCTTCAG 
GAACCTTACC TGCTGCGCAT GAGCGTGTTC AATAATGTGG TGCTCGGCCT GCGCCTGCGG 
CATGACACTG CTGCGGCACG TTGTGTCTAT GAGCAGAGCA TGAGGGCCGT GGGTTTTGAC 
AGGCCCTGGG ATTTCGCGCA ACGCGGCCCT GCGGAACTTT CCGGCGGGGA ACGCCAGCGC 
GTGGCCCTTG CCTCGCGTCT GGCACTGCGC CCCGGGGTGC TGCTGCTGGA TGAACCTACC 
GCCAATGTGG ATGCAGCCAG CGCCCTGGCG GTGGTGAGCG CTATTGAGGC CTGCCGGAAC 
AAAGGCGTAA CCGTGATCTG CGCCACGCAT GATCCGGCGC TGATCCGCAC ACTCGCTGCC 
CGCGAACTAC AGCTCGGCAG GCACTGGAAT GAGGCGGCGA AGGGATTTCC GGCATCCTGA
 
Protein sequence
MKTIQYKGRN LVQMYGGRIA LNLPCLEVEK GETLALTGPN GCGKSTLLRL LAFLERPASG 
TLRYAGNAAA SRQEVTLLLQ EPYLLRMSVF NNVVLGLRLR HDTAAARCVY EQSMRAVGFD 
RPWDFAQRGP AELSGGERQR VALASRLALR PGVLLLDEPT ANVDAASALA VVSAIEACRN 
KGVTVICATH DPALIRTLAA RELQLGRHWN EAAKGFPAS