| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1762 |
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| Symbol | |
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| ID | 7285474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 2128456 |
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| End bp | 2131554 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643582581 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002480337 |
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| Protein GI | 220905025 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA ACATAGGCTC CCTGAAAATG CGCTCTACTG CCTGCGCACA GCATGAATGG
ATAAAATATC TGCCTTCTGT TTCATTAATA TTCCTGTCCA TTCTGATCGT TTATGTTTTC
AGTATCCCCA ATCCCATGAT CATCCTGATG ATCCCCATTG TGTACGCCAC ATATTCCAGC
GGCTATCTTG GGGGCGCTCT TACCGGCTGC GTGGCGTTTG CGTACAGCGC CCATTTTTTT
CTGGTCAAAA CCAGCGATCC GTCCGGCGCT TACAAATCCG TCACCATTGC CCTGTCTATC
TTCGCCATTG TCCTTCTTGT GGGAAAACTC AAATCACGGG AAGAAAAAAA CATCCAGGAA
CTTAAGCGTT ACGGTGATGC GCTGGTTCAC ATGGCCACCA CCGACAAGCT GACGGGAGCC
TCGAACCGGC ACGCTTTTTT CAAGAAAGGG GCCGCCCTGC ACGAGCACAG CAAAAAATTC
AACATGCCCG TCTCTGTTCT TTTTATTGAC ATTGACCACT TCAAGCAGGT GAACGACCTC
TATGGACACG CCTTCGGCGA TGCTGTGCTG GAGCGTATTT CAGGTGCCAT CAAGCGCTGC
CTGCGCGGCA GCGACATCAA CTGCCGCTAT GGCGGCGAAG AGTTTGTGGT TCTGCTGGCC
CACGCGGACA GTGATGCGGC ACATCTTGTG GCGCACCGCA TCATGAACAT GGTGCAGTGC
ATACGCTTTC AGGAGTATCC CGACCTGCGG CTTTCTGTCA GCATCGGCCT GTCCAGCATG
CAGCCTGCGG CCCCCCGAAG CCTTGAGCAC CTTATCCGCA GCGCAGACAG CGCCATGTAC
CAGGCCAAAC AGGACGGTCG CAACCGCGTG GTTGTGGAAC ATCCCCAACC GTATACAGGT
CCCCCCAGAG AAATTCCCCA GGCCACCCTT CAGACTGCCG GGCCGACAAG CCCAATGGAT
CAGGGCCTGT TCTCCGGCAT GCCGGAAGAA GAAAAAGCAT TGATGCAAGA CACCCTGCTG
AGCACCCTCG AGCAAATGCT CGAACTGGTC TATGTGGTGG ATGTCGCCAC GCATGAAATC
CTTTACATCA ACGCCTCGGC ACGGGAAAAA TACGGAATCG GCAATCCGCG CGGCGCCAAA
TGCCATCAAC TGCTGCAAGG GCTGGACGCT CCATGCTCCT TCTGCCTCAA CGACCGGCTC
ACATTTGACA GCGTGTATTC CTGGGAATTT ACCAACAAAA TGCTGGGGCG GCACTTCATC
CTGCGCGACA GGCTCGTGAA CTGGAACGGC AGAAAAGCAC GGATGCAGAT CGCCACAGAC
ATCACAGAAC GGGAAATGGA ACGCCACGCG CTGCAATACG CGCTGGCGGG CGAACATGTC
ACCAGAGATT GCATTGCCCT GCTCTACAAT GCAAAAAGCC TGTCTGAAGC TTTGGAAGAC
CTGCTGGAGC GAGTAGGCAA ACACTTTGAC GCAGACCGCG CCTATTTCTT CCGGCTTTCC
GGCGAAACCT TCGCACTGAA CAGCGAATGG CGCGCCTCCC GCCTGACCCA GAGGCGCTAC
CAGACGCTGG ACATGGCCCG CTTTCACCAG TGGGAAATAT CTGCGGATAC CAGTGAATAC
CTCGTTATCA AGGATATGGA ACAACAGGCG GATGCCTATA AGGACCTGTA TGACCAAGGC
ATCCGTAATC TTGTGGTCAT GCCTCTGGAG CAGAACGGAG CGCTGCTGGG CTTCTGGGGC
ATGGAAAACG CTGCTTCCGA AAAGATCCGC GAAATCGCGC CTCTGCTGCT TTCGCTGCGC
TACTTTCTGC TCTCAGCCAT ACGTCGCATC AACTACGAAA AGCTTCTGGT CAAACTGAGC
TTTGAAGACA GCCTCACGGG CCTGCACAAC CGGAACTCTT ACCTGCAAGG CATTTCCGGC
GCTAAAGAAG TGCAGAATGC GGGCATCGCC TATCTTTCCA TCAACGAAAT GAAACGGATC
AACAACGTGT TCGGCCAGGC TCACGGTGAC AGGCTGTTGG CTGAATGTGC GCACTGCCTC
AAAAATGCTT TTCCTTCGGG CACGGCCTAC CGCGTGGGTG GGGACGAATT TCTTGTCATG
TGCAAAAACA TGCCCCGGAA AGATTTTGAG CAGTGCGTGC GGCTGCTCAA GGTGCACTGC
TCCACCTTTC AGGACTGCCG CGTGGCCATC GGCCATCAGT GGTCCGAAAC AGCAGCCGAC
ATGCAGAACC TGGCACATGC TGCGGAAAAA CGCATGTATC AGGACAAGAA AAACCACTAT
CGAAAAAACC TTCCCAGTGA CCGTTACCGC CACTATAACG ATGACGTGTT CTGTCTGACC
GAACCGGGCA TGCTGGAAAA AAGCCTGCGC GAAGGCGCTT TTACCGTTTA CCTCCAGCCC
AAGGTGTCTT CTGCCGACCG CAGGGTCAGC GGCTGTGAGG CTCTGGTGCG CTATCTGCAA
AAAGATGGCA CGGTTACGCC ACCGGCACAA TTTCTGCCAG TTCTTGAAGA CACAAAACTC
ATCGGCATAC TTGATTTTTA TGTTTTTGAC ATTGTCTGCG CCAGCATAGC CAGATGGTTT
GCCGAAGGCA GGCAGGCTAT TCCCATATCA GTAAATTTTT CGCGCTACAC TCTGGCGGAA
CAGGATTTTC TCACGCGCCT GCAGACGGTT TTCAACGGCT ACGGCATTGA TAAAAAATGG
GTGATCGTTG AGGTGACGGA AAGCGTGAAA GGCGTGGAGG GCATGAATCT GCTTGCCCTG
ATTGACAGTA TCCGCGAACT GGGCTTTGCC GTGGCCATTG ACGATTTTGG GGTAGATTTT
GCCAACCTCT CACTCTTTTC GCTGGCAAAC TTCGACGAAC TCAAGGTGGA TAAAGCCCTT
GTGGACAGTA TCGTGACCAA TCAGAAAACC CAGATGGTCA TTGAAGCCGT GGTGGACATG
TGCCGCAGAA TGAACATCCG CGTGGTGGCC GAGGGGGTGG AAACAGAAGA ACAGTTCGCC
ATCCTCAGGC AAAAAGGCTG CGAACAGGTT CAGGGCTATC TGTTCAGCAA GCCGTTACCC
ATGACGACAT TTGAAAAAAA GTATCTGCCC GGTCAATAG
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| Protein sequence | MKKNIGSLKM RSTACAQHEW IKYLPSVSLI FLSILIVYVF SIPNPMIILM IPIVYATYSS
GYLGGALTGC VAFAYSAHFF LVKTSDPSGA YKSVTIALSI FAIVLLVGKL KSREEKNIQE
LKRYGDALVH MATTDKLTGA SNRHAFFKKG AALHEHSKKF NMPVSVLFID IDHFKQVNDL
YGHAFGDAVL ERISGAIKRC LRGSDINCRY GGEEFVVLLA HADSDAAHLV AHRIMNMVQC
IRFQEYPDLR LSVSIGLSSM QPAAPRSLEH LIRSADSAMY QAKQDGRNRV VVEHPQPYTG
PPREIPQATL QTAGPTSPMD QGLFSGMPEE EKALMQDTLL STLEQMLELV YVVDVATHEI
LYINASAREK YGIGNPRGAK CHQLLQGLDA PCSFCLNDRL TFDSVYSWEF TNKMLGRHFI
LRDRLVNWNG RKARMQIATD ITEREMERHA LQYALAGEHV TRDCIALLYN AKSLSEALED
LLERVGKHFD ADRAYFFRLS GETFALNSEW RASRLTQRRY QTLDMARFHQ WEISADTSEY
LVIKDMEQQA DAYKDLYDQG IRNLVVMPLE QNGALLGFWG MENAASEKIR EIAPLLLSLR
YFLLSAIRRI NYEKLLVKLS FEDSLTGLHN RNSYLQGISG AKEVQNAGIA YLSINEMKRI
NNVFGQAHGD RLLAECAHCL KNAFPSGTAY RVGGDEFLVM CKNMPRKDFE QCVRLLKVHC
STFQDCRVAI GHQWSETAAD MQNLAHAAEK RMYQDKKNHY RKNLPSDRYR HYNDDVFCLT
EPGMLEKSLR EGAFTVYLQP KVSSADRRVS GCEALVRYLQ KDGTVTPPAQ FLPVLEDTKL
IGILDFYVFD IVCASIARWF AEGRQAIPIS VNFSRYTLAE QDFLTRLQTV FNGYGIDKKW
VIVEVTESVK GVEGMNLLAL IDSIRELGFA VAIDDFGVDF ANLSLFSLAN FDELKVDKAL
VDSIVTNQKT QMVIEAVVDM CRRMNIRVVA EGVETEEQFA ILRQKGCEQV QGYLFSKPLP
MTTFEKKYLP GQ
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