| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1717 |
|---|
| Symbol | |
|---|
| ID | 7285428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2076182 |
|---|
| End bp | 2078212 |
|---|
| Gene Length | 2031 bp |
|---|
| Protein Length | 676 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643582536 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_002480293 |
|---|
| Protein GI | 220904981 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAACC AGATGAGTCG CAACCTGATG CTGTGGGCCA TTATCGTCCT GGCGATGGTT
ATGCTTTTTA ATATGTTCCA GCAGCCACAG GGCGTGATGC AAAGAGTGCC CTATTCTGAC
TTTCTGAGTC AGGTGGACGG CGGTCAGATA CTGTCTGTAA CCATGCAGGG GCACACGCTT
ACAGGTAAAA CATCAGACGG CAAAACCGTG CAGACCTACG CTCCGCAGGA CCTGGGTCTG
GTTAACCGCC TTATTGAAAA AAAGGTGGAA GTCAAGGCAG AGCCGCCGGA AGAGCAGCCC
TGGTACATGA CGCTGCTGGT TTCGTGGTTT CCCATGCTCC TGCTTGTGGG CGTATGGATC
TTTTTCATGC GGCAGATGCA GGGCGGCGGC GGAAAGGCCA TGAATTTTGG CCGCTCACGC
GCCCGCATGC TCAATCAGGA CAGCGCCCGC GTCACTTTTG CCGATGTGGC CGGGGTGGAC
GAAGCCAAGG ATGAACTCGC CGAAGTGGTG GAGTTTCTGT CCAATCCCAA AAAATTTACC
CGGCTTGGCG GGCGTATCCC CAAGGGGGTG CTGCTCGTGG GGCCTCCCGG TACGGGCAAG
ACGCTTCTGG CGCGCGCCGT TGCAGGTGAA GCCGGGGTGC CTTTCTTTTC CATTTCCGGC
TCGGACTTTG TAGAAATGTT TGTGGGCGTG GGCGCTTCGC GCGTGCGCGA CCTTTTCGTG
CAGGGCAAAA AAAATGCGCC TTGCCTTATT TTTATTGACG AAATTGACGC TGTTGGCCGT
CAGCGCGGCG CCGGACTCGG TGGCGGGCAT GACGAGCGCG AACAGACGCT GAACCAGATG
CTGGTAGAGA TGGACGGTTT TGAAAGCAAT GAGGGTGTCA TCCTTATTGC CGCCACCAAC
CGTCCCGACG TGCTGGACCC GGCCCTGCTG CGTCCCGGCC GTTTTGACCG TCAGGTGGTG
GTTCCCACCC CCGACCTTCG CGGGCGTCGC CGTATTCTTG AGGTACACAC CAAGCGTACC
CCGCTTTCCG GCGATGTGGA CCTGGAGGTT CTGGCCCGCG GTACGCCCGG CTTCTCCGGC
GCGGATCTGG AAAACCTGGT CAACGAGGCT GCCCTTCAGG CTGCCAAGCT GAATCAGGAC
AGGCTGGACA TGCACGACTT TGAATACGCC AAGGACAAGG TTCTTATGGG GCGTGAGCGC
CGCAGCCTCA TCCTTTCTGA TGAGGAAAGA CGCATCACAG CCTATCACGA GGGCGGCCAT
GCGCTGGCGG CGCGCCTTTT GCCCGGCTCG GACCCGGTGC ACAAGGTCAC CATCATTCCG
CGCGGGCGCG CTCTTGGCGT GACCATGCAA CTGCCCGAAG AAGACCGTCA CGGCTACTCG
CGCTCCTATC TGCGCAATAC CCTGGTGGTT CTGCTTGGCG GCCGCGTGGC CGAAGAGCTT
ATTTTTGACG ATATCACCAC CGGGGCCTCC AACGACATCG AGCGCGTCAC CCGCATGGCC
CGTAAAATGG TCTGCGAGTG GGGTATGAGC GAAGCTGTCG GTACGCTGGC TATCGGCGAA
ACCGGCGAAG AGGTCTTTAT CGGCCGGGAA TGGGTGCAGA ATAAGAACTT CAGCGAAGAC
ACCGCTCGCC TGGTGGATTC GGAGGTCAAG CGTATTGTGG ACGAAGCGCA TGAGCGCTGC
CGCACGCTGC TGAAGGAAAA CGAAGAAACG CTGCACCGCA TTGCCCGTGC CTTGCTGGAT
CGTGAGACCA TTACCGGTGC AGAACTTGAA CTCCTGATGG AAGACAAGGA GTTGCCTCCG
CTGGACAGCA ACGGTAAACC CGTCAAGTAT TCCGAAGCTC CCAGCCGCCC CGGCAAGAGC
GGCGGAAGCG CCAGGGGCGA GTCAGCCGTT GGCGACGAGC CTGCCGAGTT CACCCTTGAG
CCGGATACAG GCAGTGAAGA TGCCCCGGCA GCTCCGGCGG AAGCGGAAAG TGCTGGAAGC
GGCGAAGTGG CCGCCAAGAA TGGTGAAGAC GACAACAAGC GAAATCAGTA A
|
|---|
| Protein sequence | MLNQMSRNLM LWAIIVLAMV MLFNMFQQPQ GVMQRVPYSD FLSQVDGGQI LSVTMQGHTL
TGKTSDGKTV QTYAPQDLGL VNRLIEKKVE VKAEPPEEQP WYMTLLVSWF PMLLLVGVWI
FFMRQMQGGG GKAMNFGRSR ARMLNQDSAR VTFADVAGVD EAKDELAEVV EFLSNPKKFT
RLGGRIPKGV LLVGPPGTGK TLLARAVAGE AGVPFFSISG SDFVEMFVGV GASRVRDLFV
QGKKNAPCLI FIDEIDAVGR QRGAGLGGGH DEREQTLNQM LVEMDGFESN EGVILIAATN
RPDVLDPALL RPGRFDRQVV VPTPDLRGRR RILEVHTKRT PLSGDVDLEV LARGTPGFSG
ADLENLVNEA ALQAAKLNQD RLDMHDFEYA KDKVLMGRER RSLILSDEER RITAYHEGGH
ALAARLLPGS DPVHKVTIIP RGRALGVTMQ LPEEDRHGYS RSYLRNTLVV LLGGRVAEEL
IFDDITTGAS NDIERVTRMA RKMVCEWGMS EAVGTLAIGE TGEEVFIGRE WVQNKNFSED
TARLVDSEVK RIVDEAHERC RTLLKENEET LHRIARALLD RETITGAELE LLMEDKELPP
LDSNGKPVKY SEAPSRPGKS GGSARGESAV GDEPAEFTLE PDTGSEDAPA APAEAESAGS
GEVAAKNGED DNKRNQ
|
|---|
| |