Gene Ddes_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1685 
Symbol 
ID7285389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2029043 
End bp2029930 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content58% 
IMG OID643582498 
Productdihydrodipicolinate synthetase 
Protein accessionYP_002480261 
Protein GI220904949 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.805786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGTA TTCACGGTAT TTTCGCTGTT ACGGTAACCC ATTTCAACAA CGACGGCAGC 
ATTGATTACA GCGCCATATC CAAGCACGTC CAATGGCTGC TCCAATCCGG CGTGCACGGC
ATCATGCCCG TGGGGGCCAC CGGAGAATGG CCGGCGCTTT CCACACAGGA GCGCAAACAG
GTTGCCGAAT TTGTCATGAA AGAGGTAGAC GGCAAGGTGC CGGTGATCGT GGGGGCCATT
TCCCCCAATG TAGACGTTTC TGTCGACCTG TCGGAACATG CCGGCTCCAT CGGCGCGGCG
GGCGTCATGA TCCTCCCTCC GCCCGGCGTC CATCCGAGCC AGCACGAAAT ATACGAATTC
TATAAATACA TTTCCGGTAA AAGCCCCCTT CCGGTCATGG TCTACAACAA TCCCGGCAGT
TGCGGCGTGG CCGTGTCGCC CGAAACGCTG GGCAAGTGCG CCCAGCTGCC CAATATGGGC
TTTCTCAAGG AATCCAGTGG CGACATCATG CGCCTGACCC GGTCTGTGGA CGAAGTGGGC
GACCGCCTGG TGGTTTTCTG CGGCTGCGAA AGCCTGGCGT ATGAAAGTTT TGTCATGGGG
GCCAGAGCAT GGGTTTGCGT TCTGGCCAAT ATCGCCCCGG CCATGTGCGT CAGGCTTTAT
GACCTCATCG TCAACAAAGG CAAACTTGAC GAGGCCCGGC AGGTGTACCG CCAGATGCTG
CCCCTGCTGC GTCTGCTGGA AGATACCGGG GAACTTTGGC AGGTAGTCAA GCACGCCCTG
GTGCTCAAGG GTTTCGGCAG CGGCAGGCTG CGTATGCCCC GCCAGCCCAT TTCAGAAGGT
GTGCGCCTTG AGCTTGAACA GGTGCTCAAA CAGGCGGACT TTAGCTGA
 
Protein sequence
MNSIHGIFAV TVTHFNNDGS IDYSAISKHV QWLLQSGVHG IMPVGATGEW PALSTQERKQ 
VAEFVMKEVD GKVPVIVGAI SPNVDVSVDL SEHAGSIGAA GVMILPPPGV HPSQHEIYEF
YKYISGKSPL PVMVYNNPGS CGVAVSPETL GKCAQLPNMG FLKESSGDIM RLTRSVDEVG
DRLVVFCGCE SLAYESFVMG ARAWVCVLAN IAPAMCVRLY DLIVNKGKLD EARQVYRQML
PLLRLLEDTG ELWQVVKHAL VLKGFGSGRL RMPRQPISEG VRLELEQVLK QADFS