Gene Ddes_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1657 
Symbol 
ID7285360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1994188 
End bp1996116 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content56% 
IMG OID643582470 
Productproton-translocating NADH-quinone oxidoreductase, chain L 
Protein accessionYP_002480234 
Protein GI220904922 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.735121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATAT ACCTCTTGCT TATTCCGCTG TGTCCGCTGC TGGCCTTTGC CGTTACCCTG 
GTGTGCGGGC GCTGGTGGGG CAGCCGCGCC CACTGGCTGC CCATCGCAGC CATCGTTGTT
TCCCTGTGCT GTTCCATTCT GGCCCTGCGC GATGTCATGA ACGGCGTTAT CGTCAACGCT
GATGTGCATA ACTGGATAAC ATCGGGCAAT CTGAGCGTGT CTTTCGGTTT TCTTGTGGAC
CAGCTTACGG CAGTTATGCT TATTGTGGTT ACCAGTGTCA GCACACTGGT CCACATCTAT
TCTGTGGGCT ACATGAAGGG CGAGGACGGC TATTACCGCT TTTTCGCCTA TCTGGCGCTC
TTTTCTTTCT CCATGCTCAT GCTGGTGCTG AGCAATAACT TTTTACAGCT CTTTTTCGGA
TGGGAGGCTG TAGGGCTTTC ATCCTATCTG CTCATCGGCT TTTATTACGA AAAAACCTCG
GCATCGGATG CGGGGAAAAA AGCTTTCATT GTCAACAGGT TCGGCGATTT TGGCTTTTTG
CTCGGCCTGT TCTGCATATT CACGCTTTTC GGCAGCCTGC ATTATGATAA TGTTTTTGCC
CGTGCGGGAC TGTTGCAGGG CCTGAGCTAT ACCATTGGTG GCATAAGCAT TGACGCGGCC
ACCCTTGTCT GCCTGCTGCT TTTTTGCGGC GCAGCGGGCA AGTCTGCCCA GTTGCCCCTG
CATGTGTGGC TGCCCGATGC CATGGAAGGT CCGACGCCTG TGAGCGCCCT CATTCACGCG
GCCACTATGG TCACGGCGGG GGTCTTTCTG GTCGCCCGCT GTAATGCGTT GTTTTCCCTT
TCCCCCACAG CTCTTGGCGT CATTACCGTG GTGGGGGCAC TTACGGCGCT TTTTGCGGCC
ACCATTGCCC TCACCCAGAC GGACATCAAG CGGGTGGTGG CCTATTCCAC CATCAGCCAG
CTGGCTTTCA TGTTCATAGG CTGTGGTGTA GGGGCCTATG CGGCGGGCAT TTTTCACCTC
TTTACCCATG CATTTTTCAA GGCTCTGCTG TTTCTGGGTT GCGGTTCGGT CATACTGGGC
ATGCACCATG AGCAGGATAT GCGTCGTATG GGCGGGTTAC GAAAATATAT GCCCGTCACC
TGCGTCACAT TTTTGCTGGC TTCGCTTTCC ATTTCCGGCG TACCGGGCCT GGCAGGTTTT
TTTAGCAAGG ATGAGATCCT GCTTATGGCT TTCAACGCAG ATACCACGGC CGGCTATTTC
GCCTGGGGCG TGGGGACCTT TGTGGCCTTT TTGACGGCTT TTTATTCCTT CCGTCTGTTT
TTCAGCATTT TTTATGGTGA ATTTCGCGGC ACACAGCATC AGCGCGAGCA TTTGCGCGAG
TCGCCGCTGG TGGTCACCAT ACCTTTGCTC CTCCTGGCCT GCGGGGCTGT GGGGGCTGGC
TGGCTGGGCA TTCCGCATGT GCTTGGCGGC TCCAACCTCT GGGCCGGTTT TCTTGAGCCG
GTTGTGGGGC ATCCGCATCT GCACCTGGAT GGCCCGGCGG AGCTTATGCT CATGGGGGCT
TCAGTCGTGG CGGGGGTGTG CGGCATCGGT CTTGCGTGGT TCATGTACCA CCGCCAGACT
GAATGGCCGG AAAGGGTGGT GCAGAGTTTT CCGCGCCTGT ACAGGCTTTT TCTGCACAAG
TACCGTGTGG ACGAAATTTA CGCGGCCTGT CTGGTGCGTC CGGTCTTGTG GCTGGCTGAT
CATGTGCTGC TGCGCGTGGT GGACACCAAG GGGATCGAAG GGGTGGTCAA TGGCCTGCCC
CGTGCCATCG GCAGGCTTTC TGTCAGGTTG CGCCGTTTTC AGGACGGGCA TGTGGCCCAT
TATCTGGCCT GGCTGGCCGG AGCCTCGGTG GTGCTTCTGA TTGTGCTGCA ACTGGGAATT
TTCTCGTAA
 
Protein sequence
MPIYLLLIPL CPLLAFAVTL VCGRWWGSRA HWLPIAAIVV SLCCSILALR DVMNGVIVNA 
DVHNWITSGN LSVSFGFLVD QLTAVMLIVV TSVSTLVHIY SVGYMKGEDG YYRFFAYLAL
FSFSMLMLVL SNNFLQLFFG WEAVGLSSYL LIGFYYEKTS ASDAGKKAFI VNRFGDFGFL
LGLFCIFTLF GSLHYDNVFA RAGLLQGLSY TIGGISIDAA TLVCLLLFCG AAGKSAQLPL
HVWLPDAMEG PTPVSALIHA ATMVTAGVFL VARCNALFSL SPTALGVITV VGALTALFAA
TIALTQTDIK RVVAYSTISQ LAFMFIGCGV GAYAAGIFHL FTHAFFKALL FLGCGSVILG
MHHEQDMRRM GGLRKYMPVT CVTFLLASLS ISGVPGLAGF FSKDEILLMA FNADTTAGYF
AWGVGTFVAF LTAFYSFRLF FSIFYGEFRG TQHQREHLRE SPLVVTIPLL LLACGAVGAG
WLGIPHVLGG SNLWAGFLEP VVGHPHLHLD GPAELMLMGA SVVAGVCGIG LAWFMYHRQT
EWPERVVQSF PRLYRLFLHK YRVDEIYAAC LVRPVLWLAD HVLLRVVDTK GIEGVVNGLP
RAIGRLSVRL RRFQDGHVAH YLAWLAGASV VLLIVLQLGI FS