Gene Ddes_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1628 
Symbol 
ID7285330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1955853 
End bp1957046 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content60% 
IMG OID643582440 
Productelongation factor Tu 
Protein accessionYP_002480205 
Protein GI220904893 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGG AAAAATTTGA ACGCAAAAAG CCCCATGTAA ACATCGGCAC CATCGGCCAC 
ATTGACCATG GCAAAACCAC GTTGACCGCG GCCATCACCA AAGTGGCCAA CCTGAAAAGC
GGCGGCAAGT TCATTTCGTA TGACGAAATC GACAAGGCCC CCGAAGAAAA GGAACGCGGC
ATCACCATTG CCACCTCGCA CGTTGAGTAC GAGACCGACA AGCGTCACTA CGCTCACGTG
GACTGCCCCG GTCACGCCGA CTACATCAAG AACATGATCA CCGGCGCTGC CCAGATGGAC
GGCGGCATCC TGGTGGTGGC TGCCACTGAC GGCCCCATGC CCCAGACCCG TGAGCACATC
CTGCTCGCCC GTCAGGTCGG TGTGCCCCAG CTGGTGGTGT TCCTGAACAA GTGCGACCTC
GTGGACGACG AAGAGCTGCT CGAACTGGTG GAGCTGGAAG TGCGCGAACT GCTCTCTTCC
TACGACTTCC CCGGCGACGA CGTGCCCGTG ATCCGCGGCT CCGCACTCAA GGCCCTGGAA
TCCGATGATC CCAACTCCGC TGAAGCCAAG TGCATTCTTG ACCTTCTGGA TGCTTGCGAC
TCCTTCATTC CCGAGCCTGT GCGTGACATT GACAAGCCCT TCCTGATGCC CATTGAAGAC
GTGTTCTCCA TCTCCGGCCG CGGCACCGTT GTGACCGGTC GTGTGGAACG CGGCGTCATC
AAGGTCGGCG AAGAAGTGGA AATCGTGGGC ATCAAGCCCA CCGTCAAGAC CACCTGCACC
GGCGTTGAAA TGTTCCGCAA GCTGCTCGAC CAGGGCGAAG CCGGCGACAA CATCGGCGCC
CTGCTGCGCG GCACCAAGCG TGACGATGTG GAACGCGGTC AGGTTCTTGC CGCGCCCAAG
AGCATCACGC CCCACAAGAA GTTCAAGGCT GAAGTGTACG TGCTCTCCAA GGAAGAAGGC
GGCCGCCATA CCCCGTTCTT CACCGGATAC CGTCCCCAGT TCTACTTCCG TACCACGGAC
ATCACCGGCG TCATCAGCCT GCCCGAAGGT GTGGAAATGG TTATGCCTGG CGACAACTCG
CAGTTTATTG TTGAACTCAT CGCTCCCATC GCCATGGAAG CCGGCCTGCG CTTCGCCATC
CGTGAAGGTG GCCGCACCGT TGGCTCGGGC GTGGTGACCG AAATCAACGA GTAG
 
Protein sequence
MGKEKFERKK PHVNIGTIGH IDHGKTTLTA AITKVANLKS GGKFISYDEI DKAPEEKERG 
ITIATSHVEY ETDKRHYAHV DCPGHADYIK NMITGAAQMD GGILVVAATD GPMPQTREHI
LLARQVGVPQ LVVFLNKCDL VDDEELLELV ELEVRELLSS YDFPGDDVPV IRGSALKALE
SDDPNSAEAK CILDLLDACD SFIPEPVRDI DKPFLMPIED VFSISGRGTV VTGRVERGVI
KVGEEVEIVG IKPTVKTTCT GVEMFRKLLD QGEAGDNIGA LLRGTKRDDV ERGQVLAAPK
SITPHKKFKA EVYVLSKEEG GRHTPFFTGY RPQFYFRTTD ITGVISLPEG VEMVMPGDNS
QFIVELIAPI AMEAGLRFAI REGGRTVGSG VVTEINE