Gene Ddes_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1613 
Symbol 
ID7285312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1937374 
End bp1938360 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content63% 
IMG OID643582422 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_002480190 
Protein GI220904878 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00239827 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTC TCTGCCATTT GCTTGCGCTG AGCGCCCATG TGCCGGACGC GGTCCTGACC 
AACGAAGACC TCGCCAGGGT GGTGGACACC AACGATGAGT GGATTGTCTC CCGCACGGGC 
ATACGGCAAC GCCACAAACT GGCTGATGAC GAGAACGCCT CAGACCTTGG GCTCAAGGCG 
GCCCGCAAGG CCCTGGCCGA TGCGGGCATG GAGCCCGCAG AGCTGACCCA CGTTATCGCC 
GCCACCTGCA CCCCGGACGT GCTTTCGCCT TCCGTGGCCT GCATGATCGC CGGGCAGCTC 
GGCGTAGGCC CTGTCATGGC CTTTGACTTC GGCGCTGCCT GCTCGGGGTT TCTGTACGGC 
CTGTCCATCT GCCGCAGCCT GCTGGCTCAC CAGCCGGAAG CCAAAATTCT TTTTGTCTGC 
ACCGAAGCCC TCACCAGACG CGTGAACTGG AGCGACAGAA GCACCTGCGT GCTTTTCGGC 
GATGCGGCCA CCGCCTGCGT AGTCACGGGA ACCTCGTCCA ATGTGCTGGC CGGGGTTGAA 
GACGTGGTTT GCCAGAGCGA CGGCACGCAG CGCGACCTCA TCGTGGTGGG CGGCGGCACC 
AGCAGCCGCT ATGCCAAGGG TGACACCATT GAAGACGATT TTTTCATCAC CATGCAAGGA 
CGCGAAACCT ACAAGCATGC CGTGCGCAAC ATGGTGCACA TCTGCGAAAA CGTGCTGTCC 
CGCAATGGGC TGAGCACCGG CGATGTGGAC TTGCTGGTTC CCCATCAGGC CAACATGCGC 
ATCATTGAGG CAGTGGGCAG CCGCCTGAAC ATGACCGGCG ATCGCGTTTT CGTCAACGTG 
GACAAGTACG GCAACACCTC TTCGGCATCC ATTCCCCTGG CCATTGTCGA AGCCCGCGCA 
GCCGGGCGCA TCAAGGCCGG AGACCGTATA CTTGTCACCG CCTTCGGCGC CGGCCTGACC 
TGGGGCGCGG CCCTGCTGCG TTTCTAG
 
Protein sequence
MNPLCHLLAL SAHVPDAVLT NEDLARVVDT NDEWIVSRTG IRQRHKLADD ENASDLGLKA 
ARKALADAGM EPAELTHVIA ATCTPDVLSP SVACMIAGQL GVGPVMAFDF GAACSGFLYG 
LSICRSLLAH QPEAKILFVC TEALTRRVNW SDRSTCVLFG DAATACVVTG TSSNVLAGVE 
DVVCQSDGTQ RDLIVVGGGT SSRYAKGDTI EDDFFITMQG RETYKHAVRN MVHICENVLS 
RNGLSTGDVD LLVPHQANMR IIEAVGSRLN MTGDRVFVNV DKYGNTSSAS IPLAIVEARA 
AGRIKAGDRI LVTAFGAGLT WGAALLRF