| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1600 |
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| Symbol | |
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| ID | 7285299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1924134 |
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| End bp | 1925711 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643582410 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002480178 |
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| Protein GI | 220904866 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0237] Dephospho-CoA kinase
[COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family
[TIGR00152] dephospho-CoA kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.220651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGGC TGCAACTGAA AATAACAGCC GGGCAAGCGG GCAAGCGCCT TGACCGCATA
CTGGGTGCCA CGGTTCCGGA ACTTTCACGG GCAGCCCTGC AAAAGGTCGT GCAGGCCGGT
TGCTGTACCG TGGACGGACT GCCGGAAAAA CGCCCCGCAG CCAAAATGCG CATGGGGCAG
ACCGTGACTC TGGACTTGCC GGAACATCCG GACCGCCTTC AGCCCGAAGA AGGGCATCTG
GAACTGCTCT GGCAGGATGA TCACCTTGTG GTCTGCAACA AACCCGCGGG GCTTACGGTT
CATCCGTGCC CGTCCTGCCC GGAACAGACG CTGGTGCAGC GCCTTCTGGG GCGCTTTCCG
CAACTGTCCA GACTTGAAGG GCAGCGACCC GGCATTGTGC ACCGCCTGGA CAAGGATACC
AGCGGCCTTC TTGTAGTCGC CCTTACAGAA GCCGACTGCC TGGCTCTGGC TGCAGCTTTT
GCCGAGCGCC AGGTTCACAA GGAATATCTG GCCCTTGTAA GCGGTCTGCC GCCGCTTGAA
GGCCAGTGCC GTGAGCCGTT GGGGCGGCAC CCCACAGCCA AAATAAAAAT GGCCGTGGTC
CCGGAAGACC AGGGCGGCAG AAATGCGTTC ACAGAATGGC GCAGACTCTG GAACACGGAC
GACGGCAGCG TATCGCTGCT GGCCGTGCGC ATTCATACAG GGCGTACCCA TCAGATACGG
GTGCATATGA CACATCTGGG GTACCCCCTG CTAGGCGACA GACTTTACGC TCCCAAAGCT
GTGCAGAACA TGGCTCCCCG CCAGATGCTG CACGCATGGC GGCTGGGTTT CACCCACCCT
GCAAGCGGCG AAGACATGCG TTTTACCTGC CCGCCGCCGC ACGACATGCC GGATGCCGCT
CTGGCCGCCA TGCAGCGAAT GCAGCGGCTG GTAATCACGG GCAATCCGGG CAGCGGCAAA
TCGACGCTGT CGGCCAGCCT GGCCGCGCTG GGTGTGCCTG TCATCAGCGC CGATGACGTG
GTGGCAGATC TTTACGCTCC GGGAGGCGCG GGCAGCCAGT GGATCGGCCG GCTGCGCGGC
GGCCTGCTTG GGGCCGACGG CGCTGTGAGC AGAAGCGCCC TCATGGCCGC CATGCGGGAA
GACCCCGTTC TCCGTCGTGA TGTGGAACAG ACGGTTCACG CCCTGACACA GCAACGCATC
GCTGACTTCT GGCAGCAGCA TGAAAATGCA GGAATCCCCT TGGCCGCCGC CGAAATTCCG
CTTTATTTCG AGTGCGGCTG GCAGCATGTT TTCAGGCCTG TACCGCTCAG CGTGGGCGTA
CATTGCCCCC TGCCCCTACG CAGCGCGCGC ACGGCAGAAC ACCGGGGCTG GAATCAGGAA
AAAATGGCCG CCCTCGAGGA ATGGCAATGG CCTGAAGACC GCAAAATGGG CGCCTGTGAT
ATGGTAATCA CCAATGAAGA CGACCTGCCC CGACTTCAGG AAAAAGCCGC TGGTCTGGTT
GAAAAATTGC GCCTTCTTGA ACAGGAAAAA AAGGAAGAAC AAGCCCGCAC ACTGGGCAGG
ATCTGGAGTT CGGACTAA
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| Protein sequence | MSRLQLKITA GQAGKRLDRI LGATVPELSR AALQKVVQAG CCTVDGLPEK RPAAKMRMGQ
TVTLDLPEHP DRLQPEEGHL ELLWQDDHLV VCNKPAGLTV HPCPSCPEQT LVQRLLGRFP
QLSRLEGQRP GIVHRLDKDT SGLLVVALTE ADCLALAAAF AERQVHKEYL ALVSGLPPLE
GQCREPLGRH PTAKIKMAVV PEDQGGRNAF TEWRRLWNTD DGSVSLLAVR IHTGRTHQIR
VHMTHLGYPL LGDRLYAPKA VQNMAPRQML HAWRLGFTHP ASGEDMRFTC PPPHDMPDAA
LAAMQRMQRL VITGNPGSGK STLSASLAAL GVPVISADDV VADLYAPGGA GSQWIGRLRG
GLLGADGAVS RSALMAAMRE DPVLRRDVEQ TVHALTQQRI ADFWQQHENA GIPLAAAEIP
LYFECGWQHV FRPVPLSVGV HCPLPLRSAR TAEHRGWNQE KMAALEEWQW PEDRKMGACD
MVITNEDDLP RLQEKAAGLV EKLRLLEQEK KEEQARTLGR IWSSD
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