Gene Ddes_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1596 
Symbol 
ID7285294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1919650 
End bp1920966 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content62% 
IMG OID643582405 
ProductMATE efflux family protein 
Protein accessionYP_002480174 
Protein GI220904862 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000302768 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATGA TGTACCTTGT GTTCTTCATG GGTTTTGTGG CCGTATGGGT AGCGGGACAA 
ATAAGCGCCG AAGTACAGGC CGCCCTGGGC ATGGTCAACC AGTGCGGCAT CTTTCTCATG
GTGGTTGCCA TGGCCATTTC CAGCGGAGCC ACCGCCGCCG TGAGCCAGTC GCTGGGCGCA
CTCAAGGTGG CTCGCGCGCA GCGCTATGTG GCAACCACGG TCATAGGCTG CTTTGGCCTT
GGCTTTGTCA TGGCCCTGCT GGGCTGGCGC TTTGGCGATG CCATTCTGGG CATGCTCATG
GTTCCGGACA GCATCATGCC TGTGACAAAA GAACTCTGGC AGGTCAGCAT GCTGGCCCTG
CCCGCCCAAT ACGTATACGC TGCCACGGGC GTCATGTTTC GCGCTACGCG CCAGGTCATT
CCGCCGTTAT GGGTGGCGGC CGTGGTGTGC GCAGCCAATC TGCTGGCCTG TCTCGGCTTC
GGCCTGGGCT GGTTCGGGCT GCCCAACTGG GGTTACATGG GCCTTGCATG GGCCACGGTG
GGCGCACAAT GCCTCGGTGC GGTATGCAAC TGCGCCCTGC TTGCCCATTC GGGCTACCTG
CAACGCCGCA CCCTGCCTAC CCCCCGCTGG CTCAAGGCTG GCCTGCCCTA TCTTGTCAAG
GTGGCCCTGC CCGCAGGAGC CGCGCAGATC GTCTGGCAGT CCGGCTACCT GACCCTTTTC
GTACTGGTAG CCTCATTGCC TTTTGACAGC GTGAACGCCC TGGCCGGACT TACCGCCGGC
CTGCGGGTCG AAGCGCTTCT TTTTTTGCCG GGCATGGCCT TTAACATGAG TGTCGCCGTG
CTTGTAGGCA ACAGCCTTGG CGCGGGCAAG CCCGCCGAAG CCAAGAAAGT TGCCCTGTTT
ATGGTCGGCG CGGCTGCCCT GGCCATGAGC CTTATGGCAG CCCTGCTCTG GCCGTTCAGG
CAGGAGATCG CCCTTATGCT TTCACAGGAG CCTGGCACAC AGGCCCAGAT TGTGAATTAC
CTGACCTTTA ACCTGCTTTC CACGCCCTTT TCCATTGCCA GCACCGTCAT GGGCGGCGTA
ATGACCGGGG CGGGAGCTAC CAAGTACAAT CTGATGATTT TTGGCGGCAC CTTCTGGCTG
GTGCGCCTTC CCCTGGGCTG GCTGCTCGGA CATATGCTGT GGGGTACGGC CTCGGGCGTT
TTTGTGGCCA TGCTCGTTTC CCAATGCCTG CAGACCAGCA TCATGCTTTA CGTGGTGCTG
CGCCGCGACT GGATGCGCTT TGCCATGAGC AGGATCCGCC AGCCGCACCC TGCCTGA
 
Protein sequence
MLMMYLVFFM GFVAVWVAGQ ISAEVQAALG MVNQCGIFLM VVAMAISSGA TAAVSQSLGA 
LKVARAQRYV ATTVIGCFGL GFVMALLGWR FGDAILGMLM VPDSIMPVTK ELWQVSMLAL
PAQYVYAATG VMFRATRQVI PPLWVAAVVC AANLLACLGF GLGWFGLPNW GYMGLAWATV
GAQCLGAVCN CALLAHSGYL QRRTLPTPRW LKAGLPYLVK VALPAGAAQI VWQSGYLTLF
VLVASLPFDS VNALAGLTAG LRVEALLFLP GMAFNMSVAV LVGNSLGAGK PAEAKKVALF
MVGAAALAMS LMAALLWPFR QEIALMLSQE PGTQAQIVNY LTFNLLSTPF SIASTVMGGV
MTGAGATKYN LMIFGGTFWL VRLPLGWLLG HMLWGTASGV FVAMLVSQCL QTSIMLYVVL
RRDWMRFAMS RIRQPHPA