Gene Ddes_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1529 
Symbol 
ID7285227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1826479 
End bp1827039 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content60% 
IMG OID643582340 
Producthydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit 
Protein accessionYP_002480109 
Protein GI220904797 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 
TIGRFAM ID[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0520426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACG AAATCAAAAA AATCCGCGCT CCCTTTGATG AAGCCACTGC CCGCTCACTG 
CGCGCTGGAG ACCGTGTTCT TATTTCCGGC ACCATACTGG CAGCGCGTGA CGCGGCCCAC 
AAGCGCCTTG TGGAAACCCT GGACAGGGGC GAAGCCCTGC CTGTGAGTCT TGAAGGCGCG 
GTGGTCTATT ATGTGGGGCC AAGCCCGGCA CGCCCCGGAC AGCCCATAGG GGCCGCCGGT 
CCCACTACCT CGGGCCGCAT GGACGCCTAT ACCCCGCGCC TGCTGGATCA GGGACTTAAA 
GGCATGATCG GCAAGGGGTA CCGCAAGCCG GAAGTGGTGG AAGCCATGAA AAAACATGGC 
GTACCCTATC TTGCGGCCGT GGGAGGGGCT GGAGCGCTCA TTGCCCGCGC CGTCAAGAAG 
TATACGGTAC TGGCCTATGA AGATCTGGGG CCGGAAGCTG TTGCCGCGAT GGAAGTGGAA 
GATTTTCCGG CCATTGTGGT GATAGACAGT ACCGGTGGCA ATTTTTACGA AACGGGGCAG 
GCTCCGTACA AACGCATATG A
 
Protein sequence
MSDEIKKIRA PFDEATARSL RAGDRVLISG TILAARDAAH KRLVETLDRG EALPVSLEGA 
VVYYVGPSPA RPGQPIGAAG PTTSGRMDAY TPRLLDQGLK GMIGKGYRKP EVVEAMKKHG 
VPYLAAVGGA GALIARAVKK YTVLAYEDLG PEAVAAMEVE DFPAIVVIDS TGGNFYETGQ 
APYKRI