Gene Ddes_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1528 
Symbol 
ID7285226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1825624 
End bp1826469 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content61% 
IMG OID643582339 
Producthydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit 
Protein accessionYP_002480108 
Protein GI220904796 
COG category[C] Energy production and conversion 
COG ID[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0847181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGAAA TCCATTTTGA CGACATAGCA TGCACTGTGG CGGAACTGGC CATAGAAGCC 
TGCTACCGCC TGCCGGACGA CATGGTTGCG GCCATGCGCG CGGCACGAAC GCGCGAACCA 
TCGCCCGTGG GGCGTAACAT CCTGGATCAA CTGCTGGAAA ATGCTGAAAT CGCCGCCAGG 
GGCGATCTGC CCCTGTGCCA GGATACCGGC CTTGCCGTAA TTTTTGCCGA AGTGGGCCAG 
GATGTGCGCA TTGTGGGCGG CTCTTTTGAA GATGCCATCA ATGAAGGCAT TCGCAAGGGG 
TATACAGAGG GCTACCTGCG CAAATCCTGT GTGGACGAGC CGCTGTTTGA GCGCAAAAAC 
ACCAAAGACA ACACTCCTGC CGTCATCCAT ACCCGCCTTG TCCCCGGCAG CGGGCTGCGC 
CTGCGGCTGG CCCCCAAGGG GGCAGGGTCG GAAAACAAGA GTGTGCTCAA GATGCTCGTA 
CCGGCAGACG GCATCGAGGG CGTGCGCCAG GTGGTTCTGG ACGCAGTCCT GGCCGCCGGA 
CCCAACTCCT GTCCGCCCCT CGTCATCGGC GTCGGCATCG GCGGCACGAT GGAAATGGCC 
GCCATATGCG CCAAACGCGC AGCCGCCCGC GACCTTGAAA GCCGCAACCA CGATCCGCGC 
TATGCGGCCT TTGAAGATGA ACTGCTGGAA ATGGTCAACA AAACCGGCGT AGGCCCCCAA 
GGACTGGGCG GCATTACTAC CGCCCTCAAG GTACATGTGG AATGGGCGCC GACCCATATC 
GCCTCTTTGC CGGTCGCCGT AAATATCAAC TGCCACGCGG CGCGCCACGC CGAAGCCGTG 
CTGTAA
 
Protein sequence
MKEIHFDDIA CTVAELAIEA CYRLPDDMVA AMRAARTREP SPVGRNILDQ LLENAEIAAR 
GDLPLCQDTG LAVIFAEVGQ DVRIVGGSFE DAINEGIRKG YTEGYLRKSC VDEPLFERKN 
TKDNTPAVIH TRLVPGSGLR LRLAPKGAGS ENKSVLKMLV PADGIEGVRQ VVLDAVLAAG 
PNSCPPLVIG VGIGGTMEMA AICAKRAAAR DLESRNHDPR YAAFEDELLE MVNKTGVGPQ 
GLGGITTALK VHVEWAPTHI ASLPVAVNIN CHAARHAEAV L