| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1497 |
|---|
| Symbol | |
|---|
| ID | 7285195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 1788933 |
|---|
| End bp | 1789601 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643582308 |
|---|
| Product | hydrogenase accessory protein HypB |
|---|
| Protein accession | YP_002480077 |
|---|
| Protein GI | 220904765 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0637666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTC CCGTGGTTCG CAATGTGCTG GAAGCCAATG AAAAAATGGC GGCTCATGTG
CGCAAGCGGC TGTCTGACAG CGGGATTCTG ACCCTGAATC TCATCAGTTC GCCCGGCGCG
GGCAAGACCA CGCTGCTGGA GCGCACGCTT ACCGATCTGG CGGGAGAGTT TCGCATGGCC
GTGGTGGAAG GCGACCTGCA GACAGACAAT GATGCGCGCC GCGTGGCCGC TACCGGGGCA
CAGGCCGTGC AGATCAATAC CGATGGCGGC TGCCACCTTG ACAGCAATAT GATTCTGACA
GCGCTGGATA GTCTTGATCT TGAAGGCGTG GATATTCTTT TTATCGAAAA TGTGGGCAAT
CTTGTCTGCC CTGTGGAATT TGACTGTGGT GAAGATGCCA AGGTTGCCCT GCTGAGCGTT
GCCGAAGGCG ACGACAAGCC CGAGAAGTAC CCGCTTCTTT TCAATCTGGC CCAGGCGCTC
GTGCTGAACA AGGTAGACCT GCTGCCCTAT GTGGACTTTG ATATGGGGCG GGCCCGTAAT
TTTGCCACCA AGCTCAACAA GAAGCTGGAT ATTTTTGAAG TTTCCTGCCG CCATGGGCAG
GGTCTTCAGG AGTGGTACGA CTGGTTGCGC GCCATGCGGG CTGCCAAAAA AGAAGGCCGT
CCGCTTTAA
|
|---|
| Protein sequence | MQIPVVRNVL EANEKMAAHV RKRLSDSGIL TLNLISSPGA GKTTLLERTL TDLAGEFRMA
VVEGDLQTDN DARRVAATGA QAVQINTDGG CHLDSNMILT ALDSLDLEGV DILFIENVGN
LVCPVEFDCG EDAKVALLSV AEGDDKPEKY PLLFNLAQAL VLNKVDLLPY VDFDMGRARN
FATKLNKKLD IFEVSCRHGQ GLQEWYDWLR AMRAAKKEGR PL
|
|---|
| |