| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1399 |
|---|
| Symbol | |
|---|
| ID | 7285094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1675132 |
|---|
| End bp | 1676034 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643582207 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002479979 |
|---|
| Protein GI | 220904667 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.420526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAG GCAGCAAGGG CAGCCTGCTG TTGCAGAGCA GCAGCACCTC AAGCGGGTAT
ATGTGGATTC TGTTTGCGGC TTTTTTCTGG TCTTTGCTTG GCGTGTCTTC CAAATACTGC
ATTGCCGGTG GCGTTCAGCC TCTGGAAACC GCCTTCTGGC GGGCCGCCAT CGGCTGCATC
TGCTTTCTGA TACACGCAAC CCTGACCCGG TCACTGCGTG TCAACATCCG TGATGCCCTG
ATCTTCATGC TTTTCGGCCT CTGGGGAACA GGCGTTTTTT TTGCCGCCAT GCAAATGTCC
ATCAAGCTCA GCGGCGGGGC CACGGCCGTG GTGCTTCTAT ACACCGCGCC CGTATGGGTA
GCCTTTTTTT CGCGCCTGCT TTTCGGCGAG CACATCACCA GGCGCAAGGC CCTGGCCATA
GGGATCGCAC TATGCGGCAC AGCCCTGGTA TGTTTTACCG GTGGCAGCAT CCCGGGTGAA
ACCTCGGTGC TCGGCATCGC CTGCGGCCTG CTGGCAGGGT TCAGCTACGC CACTCACTAT
CCCTTCTACC GCTGGTGGCA GGCGCGCTAC TCCACCGCCG CCATTTACGG CTATATGCTT
ATTGGCGGCA TCGTGTCCTT GGGGCTTTTT GAACCCATTC ACCTGGATCA CAGCCCGCAG
ATATGGGGTT GGCTTTTTAT CCTCGGCTTT CTGACATGCT ATCTTGCTTA CTTCTGCTAC
GGCATGGGGC TTAAACGCAT CAGCCTGGTA CGGGCCGCAG TGACCTGCCA TCTGGAACCT
GTGCTCGGCA CACTGTGGGT ATGGCTGTTC TGGGATGAAA ACTTTACTCC GCTGGGCTGG
CTTGGTGGTG CGCTGGTGCT TGGGGCCGTC CTGCTGCTCA CTACCGACAA AAGCAAGGAA
TAG
|
|---|
| Protein sequence | MKEGSKGSLL LQSSSTSSGY MWILFAAFFW SLLGVSSKYC IAGGVQPLET AFWRAAIGCI
CFLIHATLTR SLRVNIRDAL IFMLFGLWGT GVFFAAMQMS IKLSGGATAV VLLYTAPVWV
AFFSRLLFGE HITRRKALAI GIALCGTALV CFTGGSIPGE TSVLGIACGL LAGFSYATHY
PFYRWWQARY STAAIYGYML IGGIVSLGLF EPIHLDHSPQ IWGWLFILGF LTCYLAYFCY
GMGLKRISLV RAAVTCHLEP VLGTLWVWLF WDENFTPLGW LGGALVLGAV LLLTTDKSKE
|
|---|
| |