Gene Ddes_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1392 
Symbol 
ID7285087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1666088 
End bp1668052 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content59% 
IMG OID643582200 
ProductABC transporter related 
Protein accessionYP_002479972 
Protein GI220904660 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.760197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCTG TTATTGTCGC CAAAGATTTG TACAAGTGCT ACGCTGGCTT CTCGCCGGTG 
TTGCGTGGCG TGAATATTGA AGTGGAGCCG GGCGAGATGG TTGCCATTAT GGGACCTTCA
GGGTGTGGCA AATCCACAAT GCTGCATGTG CTCGGCATGC TGCATGCGCC TGATTCCGGT
TTTCTGGAAA TTCTCGGGAA AGACGTGTTG CATCTGGACA GAGAGCAGAC CGCAGCCTTC
AGGCGTGGAA CCATGGGCTT TGTCATGCAG TCGAGCAACC TTTTCGACCA CTCCACAGTG
TTTGAAAATG TTGAATTTCC ACTTATTTAT GAGCGCGTTC CTCCGCAAGA ACGGTGGGAA
AGGGTCATCC GTGCTCTGGA ACTGGTACGG CTTTCGGCCA GGGTGCACTA CCGCAGTAAT
CGCCTTTCCG GCGGTGAGCA GCAGCGTGTG GCCATTGCGC GCGCCATGGT GAACAGCCCC
CGCATACTGC TTGCCGACGA GCCTACGGGC GCCCTGGACG CCAAGACCAG CCGTCTTATC
ATGGATAACT TCCGCAATCT TTGCCATACG GGCGGCGTAG CCATGGTTAT GGTGACCCAC
GACCCCAAGA TGGCGGAGTT TTGCGACAGT GTGTATACGC TTGAAGACGG CATTCTGCAT
TGCCGCAAGC GTGAGGTGCC GCGTATTTCC GTTCAGGAAA CATATAACCT GCTGTCCGGT
GCCAAGCCGG TGGTGCGCGG CGCGTTGGTG GCAGAGCGTT TTCCCGAGGC TTCCGGGCAA
TGTCTTATGA CCGAAGCACA CCACATGCAC GCTTCCGGGC TGCTTTCACG CATTTACGCC
ATTCGTGACA ACGGTCTTCT GGGTAGTCCC GAGGGCTACG CCCTGCCCTT GGCTGTGCGC
CGTATCGGTG CCTGGCGCAC GTTTGGCGCC TACCTTGCCA TGTTCCGTCA TATGCGCGGC
GCTTCAGCCA ATCTCTGGAG TCTCTGGCGC ACATTGCCCG GGCGAGGCCG CTGGGGACAC
TGGTTGTGGG ACCATCTGCG TTCTTTTGGT TCCGGCGCTC TGCTGGCCCG CTGGGGCCTG
GAAGAAAATA TTGAGATTTT TTATGCCGCC GGAGCGCACG GCCCGGCCAC AGCTTCATGG
GTGGCCTCGC GTCTGCTTGA TGTGCCGTAT GCTTTTGCCG TACGCTCGCA CGACCTTGCC
AACCCCGGCC TTAACTGGGC AGCAAAAGTC AACGATGCGG TTTTTGTACG CTGCGATACA
GAAGCTTCCC GTCAGGCCAT GCGTGAGCTT ATGCCTGACG TGCCGGAACA CAAGTTTGTG
GTGCTGCGTG ACCCGCTTAC GTTGACCCCC CCGGATGATG ATGCCGAACA GGCTCCTGCG
GGCAACGACG CTGCCGTCGA ACTGAATATT CTGGCTGTGG GCACGATCAG CCGCCGCAAG
GGCTATGACA CTCTTTTGCG CGCCTGCGCG GTACTGAAAA GCAAGGGTAT CGACTTCACG
CTCAGAATCG TGGGACATGG ACCGGAGCGT CTGCGTCTGC GCTGGCTGGC CTGGCGGCTT
GGTTTGCGGG GCAACGTGCT TTTTCCGGGG CGGGTCCCCC ATGAAAACAT GCCGGATTTT
TACAGTAAGG CCCATGTATT CGTAGCGCCA GGCCGCAAAA CGCGGCACGG AGATATGGAC
GGGCTGCCCT CGGCGCTCGT GGAGGCCCTG GCTTTTGGAC TGGCCGTAGT TGTCAGTGAC
TTGCCAGGGC AGACTGAGGC CGTGACTGAC GGCTGCAATG GACGCGTTGT AGCGCAGAAC
AATGCGGATG TTCTGGCCGG GGTGCTTGAA GAGCTGGCCT CAAATCCTGC AGAGCGGCGG
CGGCTGGGCG ATGCAGCACG CCGGGATCTG CCTGCATTTC TAGACGAAGA GGGCGTTGAG
GCCCGTATGA GCACGTTTTT TAAAAAGGCG TGCCGCAAGC TGTGA
 
Protein sequence
MAPVIVAKDL YKCYAGFSPV LRGVNIEVEP GEMVAIMGPS GCGKSTMLHV LGMLHAPDSG 
FLEILGKDVL HLDREQTAAF RRGTMGFVMQ SSNLFDHSTV FENVEFPLIY ERVPPQERWE
RVIRALELVR LSARVHYRSN RLSGGEQQRV AIARAMVNSP RILLADEPTG ALDAKTSRLI
MDNFRNLCHT GGVAMVMVTH DPKMAEFCDS VYTLEDGILH CRKREVPRIS VQETYNLLSG
AKPVVRGALV AERFPEASGQ CLMTEAHHMH ASGLLSRIYA IRDNGLLGSP EGYALPLAVR
RIGAWRTFGA YLAMFRHMRG ASANLWSLWR TLPGRGRWGH WLWDHLRSFG SGALLARWGL
EENIEIFYAA GAHGPATASW VASRLLDVPY AFAVRSHDLA NPGLNWAAKV NDAVFVRCDT
EASRQAMREL MPDVPEHKFV VLRDPLTLTP PDDDAEQAPA GNDAAVELNI LAVGTISRRK
GYDTLLRACA VLKSKGIDFT LRIVGHGPER LRLRWLAWRL GLRGNVLFPG RVPHENMPDF
YSKAHVFVAP GRKTRHGDMD GLPSALVEAL AFGLAVVVSD LPGQTEAVTD GCNGRVVAQN
NADVLAGVLE ELASNPAERR RLGDAARRDL PAFLDEEGVE ARMSTFFKKA CRKL