| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1383 |
|---|
| Symbol | |
|---|
| ID | 7285078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1655954 |
|---|
| End bp | 1659049 |
|---|
| Gene Length | 3096 bp |
|---|
| Protein Length | 1031 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643582191 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_002479963 |
|---|
| Protein GI | 220904651 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGG ATTTTTTTGA CCCGGAATTA TTTGCTGACT TCATTGCAGA AGCCAAAGAG
CACCTCGAAA CTATCGAGCC CAATCTTCTT GAGCTTGAAA AAGCTCCGGG GAACTTGGCG
CTGCTCAATG ACATCTTCCG CCCCATGCAC TCGCTCAAGG GCGCTTCGGG TTTTCTTGGC
CTGAACCGCA TCAATCAGCT CGCCCACAAG TCTGAAAACA TTCTGGATGA GCTGCGCAAA
GGCAGTATGG TCGTCACGCC GGAAATTATG GACGTTATTC TGGCTTCCAC AGACGCCCTG
CGCCAGATGA TTGATAACCT TGAGAGCAGC AATAGCGAAG GCGAAGTGGA AACCGGGCAT
ATCATGGCCC AGATTGACGC CATCATGGCC GGCGAAAGCC CTGTGCCGGC ACAGCCCGGG
CAAGCTGCTC CGGCGTCCCC GGTTTTTCCG GCAGAAGAGG TCACACCTGC TGCCGCCGCA
GGCCTGTCCG AAGCAGAGAG CCTTTCGGCG GCGGGAGACA TGCCTGATGT CCCGCTTTTT
GGTCCGTCAT CCGCGACGCA ATCTCAGGAT AGCGCGACCG TCAATGCAGA TGGTATGAGC
GGCAAGGAAT GGGTCGCAAC CCTGCCTGCG CTGCCGTCCT ATGCCCTTAC AGCCTTCGGT
GAAAGTCATC TCAAAGATTT CATCGATGAA TCAATTGAAA TAATTGAAAA TCTTACAAAC
GGCCTGCTTG AGCTTGAAGA AAATCCCACA GGCCAGGGCG AACTCGTCAA CGATCTCTTC
CGCTTTTTCC ACAATATGAA GGGCAATAGC GGCATTATCG GCTATAGCGA CCTTAATGCC
CTCACCCACG AAGCAGAAAC ACTGCTCAAT AACGTGCGTC AGGGCAAAAT CACCCCCACG
CACGAGCTTA TTGACCTGTT GCTGCTTGTT GTGGACGTGA TGGAAGCGCT CGTACATAAT
ATTGACGTTG CCTCCGGTCA GGCATCGCCA TTTGAAACAG ATTCCGTTGT CAAGCAGTTG
CAAAACGCTC TTGCCGGCGG TCCCATTGCC CTGCCGGCGG AACTGCTGAC CGCCCAGGGC
CGCGAACAGG CAGACTCCGG CAATCCGGAG CATGCACATG ATGCTGCCGA TGTTGCGGAT
GCGCCCGTGG AAGTGGTGAC TCCTACCATT ATTCCCGTAG GTTCTGAAGG AGATGATGCC
GAAGCTTTTC GCGTCACCGT GCAACAGCAG ATCGAAATTA TCCATGCGGC CCTGGAAACC
CTGAAAAAAG ACGGCAGCCA CAAGGATTCC ATTGATGCCC TGTACCGCTG CCTGCTGGCC
ATAAAAAATG CCTGCGGCTT TATGGGGCTG GCGGATATCA AGACCTACGC CGAACGCACG
GCCGGCATTG TGGATCAGGG GCGCAGCAGC GGTATAGACT TCGACCTTAT GGTGGACCTT
CTGGATCAGG AAGTAAGCAT CATTCAGGAC ATGGTGCGCC AGGCCCTGAA CGATGGCAAG
GTTCCTACTG ACGCCAGTTC CGCCACCACG AAACCCGCTT CTGATGAAGA TGTAGGCAGT
GCCGCGATCA TCGCAGATAA ACCTGAAGCT ACGCCGACCA CAACCAGCGC TCCCATCGCG
CCGGCTCCGG CACAGGCTGA AGTTCAGGGC GCCGCGCCAG CAGATGCAAA AACGACAGTT
CCCACGGCTA CGGCAGTTCC GGCATCCGGC GAACAAAGCA CCGAAGCAGC CTCGCGCCCC
GCTCAGCCCA AGCCTGCGCC CCCGATGACG CAAGCTGCCC CCGCACGCGC CGCGGCCCCG
CAGGCGAAAG GCGCGGCTTC CGCCGCTGAG GGACACAAAA GCTCTTCTAC CATCCGGGTT
GACCACGAAC GCCTTGATCA CCTCATGAAC CTCATCGGCG AACTGATCAT CAACCGTAAC
CGTTACACGC TTATTGCCCG TTCGCTTGAA GACAGCGGCG ACAACGTGGA TATTTCGCAT
GTGGCGCAAA GCCTTTCTGA AACGACCTAT GCCATGGCGC GCATTTCTGA CGACCTGCAA
GACACCATCA TGAAGGTGCG CATGGTTCCT GTTTCATCAG TATTCTCCCG CTTTCCCCGT
CTGGTGCGCG ACCTTTCGCG CAAAAGCGGC AAAGAGGTAG ACCTGGTCAT GGAAGGAGAA
GAAACGGAAC TGGACAAGAG TGTGGTAGAG GTCATCGGCG ACCCCCTTGT TCACCTTATC
CGCAACTCCG TTGACCACGG CATAGAATCG GAAGACGTGC GCCTTGCCGC AGGCAAACCC
GCCAAGGGAA AAGTGACGCT GCGGGCTTTT CACAAGGGCA ACTCCGTCGC TATTGAAATT
GAAGACGACG GCAAGGGCAT TGACCCGGCC AAGATGCGCG AAACAGCCAT CCGTAAAGGC
GTTATCACCC CCGAAGAGGC CGCGCAACTG GATGACCGCG AAGCCGTAGA GCTGATCTTT
GCCCCCGGTT TTTCCTCTGC CGACCAGATT ACCGACATTT CCGGACGTGG TGTGGGCATG
GACGTGGTCC GTACCAACAT CAAGAATCTC AAAGGCAGCG TCAGCACCTA CTCTGAAGTG
GGCAAAGGCA CACGGTTTAC TCTGAGTCTG CCCCTGACGC TGGCTATCAT TGATGCACTT
ATGGTGAATG TTTCCGGCCA GATGTACGCC ATCCCCCTGG ATGCCGTGTC GGAAACCACC
AAGATTGAGG CTCACCGCCT CACCGATGTG AAGGGCCGCA AGGCTGTCAC CCTGCGCGGC
GAAGTACTTG GCGTAGTGGA AATGGCCGAA ATGCTCGGCC TGCCCCGCAC AGATCCCCTG
CCGGACGTGC TTTCGGTGGT GGTCATACAC GATAATGACC GCCGATTGGG CCTTGTGGTG
GACCGCCTGC TTGAACGCCA GGAAATAGTC ATCAAACCCC TGGGTGCCTA TCTTGGCGAT
CTCAAAGGCA TCTCTGGCGC CACAATTATG GGCGACGGCT CTGTAATTCT TATTCTTGAT
CCGCATGAAA TCTACCTGAT GGCCACTTCA AAGGCCGTAT CCGTGGTTCC TGCGGGAGAA
GGCAAACCGG TGGCCACGCC TGCGGGCAGA ATCTGA
|
|---|
| Protein sequence | MSQDFFDPEL FADFIAEAKE HLETIEPNLL ELEKAPGNLA LLNDIFRPMH SLKGASGFLG
LNRINQLAHK SENILDELRK GSMVVTPEIM DVILASTDAL RQMIDNLESS NSEGEVETGH
IMAQIDAIMA GESPVPAQPG QAAPASPVFP AEEVTPAAAA GLSEAESLSA AGDMPDVPLF
GPSSATQSQD SATVNADGMS GKEWVATLPA LPSYALTAFG ESHLKDFIDE SIEIIENLTN
GLLELEENPT GQGELVNDLF RFFHNMKGNS GIIGYSDLNA LTHEAETLLN NVRQGKITPT
HELIDLLLLV VDVMEALVHN IDVASGQASP FETDSVVKQL QNALAGGPIA LPAELLTAQG
REQADSGNPE HAHDAADVAD APVEVVTPTI IPVGSEGDDA EAFRVTVQQQ IEIIHAALET
LKKDGSHKDS IDALYRCLLA IKNACGFMGL ADIKTYAERT AGIVDQGRSS GIDFDLMVDL
LDQEVSIIQD MVRQALNDGK VPTDASSATT KPASDEDVGS AAIIADKPEA TPTTTSAPIA
PAPAQAEVQG AAPADAKTTV PTATAVPASG EQSTEAASRP AQPKPAPPMT QAAPARAAAP
QAKGAASAAE GHKSSSTIRV DHERLDHLMN LIGELIINRN RYTLIARSLE DSGDNVDISH
VAQSLSETTY AMARISDDLQ DTIMKVRMVP VSSVFSRFPR LVRDLSRKSG KEVDLVMEGE
ETELDKSVVE VIGDPLVHLI RNSVDHGIES EDVRLAAGKP AKGKVTLRAF HKGNSVAIEI
EDDGKGIDPA KMRETAIRKG VITPEEAAQL DDREAVELIF APGFSSADQI TDISGRGVGM
DVVRTNIKNL KGSVSTYSEV GKGTRFTLSL PLTLAIIDAL MVNVSGQMYA IPLDAVSETT
KIEAHRLTDV KGRKAVTLRG EVLGVVEMAE MLGLPRTDPL PDVLSVVVIH DNDRRLGLVV
DRLLERQEIV IKPLGAYLGD LKGISGATIM GDGSVILILD PHEIYLMATS KAVSVVPAGE
GKPVATPAGR I
|
|---|
| |