| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1340 |
|---|
| Symbol | |
|---|
| ID | 7285033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 1608075 |
|---|
| End bp | 1609211 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643582146 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_002479920 |
|---|
| Protein GI | 220904608 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCGG GTTTTTCCTT CCATCGGTTC TTTGCGCTGC TCACCAAGGA GCTGATCCAG
ATGAGGCGCG ACAAGGCGAC ATTTTCCATG CTGCTCAGCG TGCCCCTGAT GGAAATCCTT
CTATTCGGCT ATGCCATCAA TGCAGACCCG AAGCATTTGC CGACCCTTGT GGTAGACGCT
GACCAGTCAG TCATGAGCAG GTCGCTGGTC AGCACACTGG AAGTGTCGGG CTATTTTGAC
ATCACCAACC GTCATGCCAC GGAGGATGAG GCGCGTAGCG CCTTGGCCAA CGGGGCTGCC
CAGTTTGTGG TGAATATTCC CGTTGATTTT TCACGAAGGG TTGCACGGGG CGAATGCCCG
CAGGTGTTGA TTGAAGCTGA TGCCACTGAT CCTTCTGCAA CGTCCGCAGC CATCGGGGCG
CTGTCAGGTC TGGCGGCAAG GGCCATTGAC GAAGATCTGC GGGGGCCGCT GGCCGGACTG
AAGCAGGGCA GCGCACCTTA TGAATTGTTG GTTCATCGCC GGTACAATGA AGAAAATGAA
TCAGCCTTCA GTGTGGTGCC GGGCATACTT GGTGTGGTTC TTTCCTCCAC TATGATCATG
ATGACCTCCA TAGCCATGAC CCGCGAACGG GAGAGGGGCA CGCTGGAGAG CCTGCTTGTG
GCCCCTATCC GGCCGCTGGA AATGATGCTG GGCAAGATAT CTCCCTACCT GTTGATAGGC
TTCGGCCAGA TTCTTGTCAT CATGACGGCG GCCAAGGTGC TCTTTCATGT ACCCATGCTT
GGCTCAATGC TGCTGCTGTT TATGGTGTGC GTGGTGTTCA TTTGTGCCAA TCTGGCCTTG
GGGTTCATCT TTTCATCCAT TGCCAAGAAC CAGATGCAGG CCAACCAGGC TTCGTCAGGT
TTTTTGTTGC CCTCCATCAT TCTGTCCGGT TTCATGTTTC CGTACCGGGG CATGCCGGAA
TGGGCGCAAT GGCTTGGCGA AATACTGCCC GTAACGCATT TCTTGCGCAT AGTGCGCGGC
ATTCTTCTCA AGGGGAATAC GCTGGGAGAC GTCTGGGGCG ACTTCTGGGC GCTCGTTCTG
ATTCTTGGTG TTGTTTGTGC TCTCTCAATA CGCTGCTATC GGCGCACGTT GGATTAA
|
|---|
| Protein sequence | MFAGFSFHRF FALLTKELIQ MRRDKATFSM LLSVPLMEIL LFGYAINADP KHLPTLVVDA
DQSVMSRSLV STLEVSGYFD ITNRHATEDE ARSALANGAA QFVVNIPVDF SRRVARGECP
QVLIEADATD PSATSAAIGA LSGLAARAID EDLRGPLAGL KQGSAPYELL VHRRYNEENE
SAFSVVPGIL GVVLSSTMIM MTSIAMTRER ERGTLESLLV APIRPLEMML GKISPYLLIG
FGQILVIMTA AKVLFHVPML GSMLLLFMVC VVFICANLAL GFIFSSIAKN QMQANQASSG
FLLPSIILSG FMFPYRGMPE WAQWLGEILP VTHFLRIVRG ILLKGNTLGD VWGDFWALVL
ILGVVCALSI RCYRRTLD
|
|---|
| |