Gene Ddes_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1318 
Symbol 
ID7285010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1566760 
End bp1568043 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content60% 
IMG OID643582123 
Productprotein of unknown function DUF214 
Protein accessionYP_002479898 
Protein GI220904586 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCC GCCTCAATGC TTCCGGTCGT TTTCCGGCTC TGACGCAGAT GCTCCGCCTT 
TCCTGGCGGG ACTACGCGCG GGAAAAGCTG CTCTCCGCCT GCGCTATTCT GGGACTTGCC
GCAGTGCTCA CACCGCTGCT GGTGCTTTAT GGTGTCAAGT TCGGCGTTAT GCAGACGCTG
ACGGACAGGT TAGTCAACGA ACCGCGCAAT CTTGAGATAT CACCAGTGCT CAGCGGACGT
TTTCCGCAGC AGTATCTTGA TGATCTGGCC GCACACCAGG ACGTGTCCTT TGTGCTCGCC
CGTACGCGCT CCATTGCCGC CACTATGGAC CTGACAGCCG GTGACGGACC CCGAAAGACG
AATCTGCTGG TCTCGCTCGA GCCAACGGCC CCGGGTGATC CCCTTCTGCG ACGCTATGAT
GCCGCGGTAC CGGGCATGCC ACAAAACGCG GCTACTGAGG CCATCGGCAT ATCCCTTTCA
ACCCCCGCAG CAGAAAAGCT GCATGTGACA ACCGGAGACA CGCTTTCCGG CAGGGTGGAA
CGCCGCCTGA ACGGTCAGGC ACAAAGCGTA CGCGTTCCCC TGCGCGTTGT TTCCGTTCTG
CCCCTTGCGG CCCAGCAGAA GGACGTGGCC TTTATTCCTT TTTCCCTGCT TGAAGCCACC
GAAGATTACC GTGATGGCCG CGCAGTGCCT GAACTGGGAA TACAAAACGG CTGGACCGGT
GAGGAACGAC CGCAAGAGGC GCGCCTCTAT CCCGGCTTTC GGCTTTACGC CAAGGACCTG
GACGCTGTCA TGCGCCTGCG TCAGGCCTTT GCCCAACAAG GGCTGGAAGT TTACACCCAT
GCCGAAGAAA TAGAACAGGT CAACGGCCTG TCCCAGGCCC TCAATCTCGT CTTTGCTCTT
ATCTGTGCGG CTACGGCTGC CGGCTTTCTC GCATCTACTA CCAGCAGCAC GCTTGCCAGT
GTAAAACGCA AAGAACGCAC ACTGGGCCTG CTGAGCCTGG CAGGCTTTAC CACCGGTCAG
CTCATGCTAC TGCCTCTTGT GCAGGCACTG CTTACCGCCC TTCTCGGCAC AGGCCTCGCA
TCAGGAATGT ATACACTGGC GGCGCTGGTC ATCAATCAGC TTTTCAGCGC CAGCCTCAGC
GGCATGGAGC AGGTCTGCCG CCTGCTGCCT CAACATTTTT TCATTGCCTT TGCCGCAGTG
GCCGGACTTG CCGTGGCTGC GGCGCTGGGA CCGGCACTGC GGGCCGCGCG CATCGAACCT
TCGGAGGTCA TCCGTGAAAT ATAA
 
Protein sequence
MSRRLNASGR FPALTQMLRL SWRDYAREKL LSACAILGLA AVLTPLLVLY GVKFGVMQTL 
TDRLVNEPRN LEISPVLSGR FPQQYLDDLA AHQDVSFVLA RTRSIAATMD LTAGDGPRKT
NLLVSLEPTA PGDPLLRRYD AAVPGMPQNA ATEAIGISLS TPAAEKLHVT TGDTLSGRVE
RRLNGQAQSV RVPLRVVSVL PLAAQQKDVA FIPFSLLEAT EDYRDGRAVP ELGIQNGWTG
EERPQEARLY PGFRLYAKDL DAVMRLRQAF AQQGLEVYTH AEEIEQVNGL SQALNLVFAL
ICAATAAGFL ASTTSSTLAS VKRKERTLGL LSLAGFTTGQ LMLLPLVQAL LTALLGTGLA
SGMYTLAALV INQLFSASLS GMEQVCRLLP QHFFIAFAAV AGLAVAAALG PALRAARIEP
SEVIREI