Gene Ddes_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1317 
Symbol 
ID7285009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1565951 
End bp1566763 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID643582122 
ProductABC transporter related 
Protein accessionYP_002479897 
Protein GI220904585 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATC AGGTTTTTTC CCTGCGGCAG ATAAGCAAAA GCCGCCCCGG CGCTGAAGGC 
TTCAGCCTGC ATGTGGAACG TCTTGATATT CCCCGCAGTG GCCTGCTGGC GCTGGTGGGA
CCCAGCGGTT GCGGCAAGAG CACGGCTCTG GACTTACTGG CCTGCATACT CCGTCCCGAT
GTGCCTCCGG GTATGAGTAC CGAAAAGGAG CAGCGCTTTC TGTTCAGCCC TGATTCGCAT
GACAACATTG ATGTGTTGCA GGCCTGGCGC GCGGGCGGCC CCAACGCCCT TGCCCTGCTT
CGCCAGCGCC ACCTGGGCTA TGTATTGCAG ACCGGCGGAC TGCTGCCCTT TCTTACAGCC
GGCGATAATA TTCTTCTGCG CTGCCGCAGC CTGGGCTGCT TGGAAGAACG CAGGCCGCAG
GTGCAGGCAA TTGTGGAAGG GCTTGGTATC GGACGTCTGC TTGACCAGTA TCCGGGAACG
CTGTCGGTCG GCGAACGCCA GCGGGCGGCC ATTGCCGCCG CTCTGGCCCA CGGTCCCGGC
GTGGTGCTGG CCGATGAGCC TACGGCAGCC CTTGACCCCA TGCATGCCCG CAACGCCCTA
CGCATTTTTA CCGATCTGGC CCGTAAACTG CAAATTACCG TGATAATGGT AACGCATAAC
CTCGAAATGG CTGTAGAAGC GGGTTTCACC CCGGTGCAGG TCATCCCCGA AGAAAGCGGA
AAAGGCATCG TATCACGCAT TGACCACGCG GCAGACTCAG GCGCGCCCCG CAGCAGGCCC
CGCGATCGGG ACCCCCGGGA GGTCCAGGCA TGA
 
Protein sequence
MDNQVFSLRQ ISKSRPGAEG FSLHVERLDI PRSGLLALVG PSGCGKSTAL DLLACILRPD 
VPPGMSTEKE QRFLFSPDSH DNIDVLQAWR AGGPNALALL RQRHLGYVLQ TGGLLPFLTA
GDNILLRCRS LGCLEERRPQ VQAIVEGLGI GRLLDQYPGT LSVGERQRAA IAAALAHGPG
VVLADEPTAA LDPMHARNAL RIFTDLARKL QITVIMVTHN LEMAVEAGFT PVQVIPEESG
KGIVSRIDHA ADSGAPRSRP RDRDPREVQA