| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1306 |
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| Symbol | |
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| ID | 7284998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1547214 |
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| End bp | 1549916 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643582111 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_002479886 |
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| Protein GI | 220904574 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.493804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA ACTCTGCAAT GCCTGCCCTG CCGCCTCTTC CCCCCTGTCC GCTGGATCAG
GAGAGGCAAC ATCTGCTTGC TGCCCTTGAG CAAAACTGCG GGCTTGTACT CAGTGCCAGC
CCTGGTGCGG GTAAAAGCAG CAGGGTTCCC CTGTGGTTGC TCGCCGCCCC GTGGCTCCGC
GGGCGCAACG TACTGCTGCT TGAACCGCGC CGCGTGGCGG CCCGTGCCCT TGCCCGGTAC
ATGGCCGCCC TGTTGGGCGA AAATGTGGGG CACACTGTGG GCTTGCGCAT GCGCGACGAA
AATCGCACCG GTCCGCACAC ACGCATTGAA GTCGTCACTG AGGGGGTGCT CACCCGCATG
CTGCAAGAGC AGCCGGATCT GCCCGCCACT GCTTGCGTAA TTTTTGACGA ATTTCACGAG
CGGTCGCTTG CTGCCGATAT GGGACTGGCG CTTTGCCTGG AGAGCCGGGC GGTTCTCAGG
CCGGACCTGC GCCTCGTGGT CATGTCTGCC ACCCTGGACG TTCAGGCTGT GTCCGACCTG
ATGGGGCAAT GCCCTGCAAT TCATAGTCCC GGCCGCTGCC ATCCGGTGGA TCTGCACTAC
CTGCCCCACA CACTTCAGAC AGGCGGAAAA ATTTCATCAG CAGGCGGGTC TTTTGCATTG
TGGCAGCATA TGGCCAGCGT CATTCTTACA CTATTGCAAA AAGAGCCGGG CAGCCTGCTG
GCTTTCTTGC CCGGCGCTGG TGAAATCCGC CAGACAGCCT CTTTTCTGGA GGAACGTCTA
CCCCCGGACG TGCTGCTCCA TTCGCTTCAC GGCAATCTGT CCGCAGCGCA ACAGGATGCA
GCCATTGCCC CGGCCCCGCC GGGCAAACGC AAGGTAGTGC TTGCTACTTC GATTGCCGAA
ACCTCTCTGA CCATCGAAGG CGTGCGAATG GTCGTGGATG CAGGGCTTGC GCGCCTTTCA
CGCTTTGCCC CCGCCAGCGG CCTTTCCCGC CTGGTGACGG AGCGTGTTTC TCTGGCCGGG
GCGGATCAGC GTACCGGCCG CGCCGGACGG ACAGAACCAG GTATTTGTTG TCGCCTGTGG
GCCAAGGAAG AAGAAAAAGG CATGCGCCCC CACATCCGCC CGGAGATACT CGATGCAGAC
CTCACCGGGC TTTTGCTGCA ATTGGCGGCA TGGGGTGCAT CTGACCCTTC AGCCATGCCC
TGGCTTGATG CTCCGCCGTT GCCGCACCTT GCCGTCGCCA GACAATGCCT TGAGCTTCTG
GGGGCCTTTA CCCCTGCCGG AAAACCTACA GATCTCGGGC TTCGCATGGC CGCTCTGCCG
CTTGAACCAA GATCTGCGCG CATGCTCCTG TGGGGCGCGC AGCACGGGCA TGGCCCACTG
GCCTGCTGCC TGGCCGCGCT GCTTGAAGAA AGAGATCCTT TGGCCAACAC CCAGCGCCCC
GAAAAACGCG GGCAATGGGG CTGGCGCCAG ACAGACAGCG ATCTGGCGCT TCGTCTTGAC
TGGTTGTGCC GTTCCCCGCA CCAGGGCGCA ACTGCTCCGG CCCGGGAGCA TGCCCGTCAG
CGCGTGCGAC GCCAAAGTCT GCGCCTGACC CGGCTTCTTG CGCAAATCAT GAAAACGGAT
CACGACCCCA GTCCCATCCC GGACCATAAG CAAAACGCTG CATCGGGCCT GTTCGCCGAT
GCTCTTGCCG ATGTCAGCGC TCTGGGCTTA CTGACAGCCG TGGCGTGGCC TGAATACGTT
GCCATGCTCC AGCCCGGAGG GCAAAAAGGG GATATTGGCG CACCAATGCG CACATATCTC
ATGCGCAGTG GAAGAGCGGC GCGCCTGCTC CAAACAGACT CCCTCGCACG TAGTGAATTT
CTGGCAGTGG CCCAGGTAGA CGGCACGCTG CCTCATGGCC GTATTCGCCT TGCCGCTGCA
CTGTCCGGCA CGGATATGGA AGAGCTTTTC TCCTCACAAG CAGTTCAGAC GGATATCACA
TGTGTCACTG AGGCCGGGCA GGTCACTGCC CGCCGCCAAC GCAGACTCGG GGCTATTGTG
CTGGAAGACA TTCCTCTGCC ACGGCCCGAA CCGGAACACA TCGTCGCTGC CCTGTGTGCT
CACGTACGCG AGCGCGGCCT CACCTGTCTG CCCTGGAACG TCCAAAGCCT CCAGTGGCGG
GCGCGTGTGG CCCTGCTGCA TGAGCTGGAG CCGGATGCCT GGCCCGCTGT AAGCGACGCG
GCCCTGCTGG GCAGCCTGGA AGCATGGCTC GGCCCATTTA TGACAAATTG TACATCGCTG
GCCGCCCTGT CAGCCGAAAC ATTTTCTGCT GCCCTGCACA GCCTTCTTTT GGGAAATGGC
GGTCGTCTGC TGGACAGGCT TGCCCCCACG CACTGGCAAG CGCCCTCCGG CGCACAACGC
CCCATAACAT ATGGTGAAGA AGGCGGTCCG GCGCTGGATG TAAAATTGCA GGAAATGTTC
GGCTGTGTGG ACACGCCGTG CATCGCCGGA GGGCGCGTTC CCCTGCTGTT GCGGCTCAAT
TCTCCTGCCG GCCGCCCCCT GCAGGTCACG CGCGACCTGG CGCATTTCTG GCGTAACGGC
TACCCCGCAG TACGCGGAGA AATGCGGGGA CGCTATCCCA GACATCCCTG GCCCGAAGAT
CCTCTGACAG CAACGGCCAC GGCGCTGACC AAGAAAAAGC TGGCCGCATC GGGCAAAAAA
TAA
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| Protein sequence | MNKNSAMPAL PPLPPCPLDQ ERQHLLAALE QNCGLVLSAS PGAGKSSRVP LWLLAAPWLR
GRNVLLLEPR RVAARALARY MAALLGENVG HTVGLRMRDE NRTGPHTRIE VVTEGVLTRM
LQEQPDLPAT ACVIFDEFHE RSLAADMGLA LCLESRAVLR PDLRLVVMSA TLDVQAVSDL
MGQCPAIHSP GRCHPVDLHY LPHTLQTGGK ISSAGGSFAL WQHMASVILT LLQKEPGSLL
AFLPGAGEIR QTASFLEERL PPDVLLHSLH GNLSAAQQDA AIAPAPPGKR KVVLATSIAE
TSLTIEGVRM VVDAGLARLS RFAPASGLSR LVTERVSLAG ADQRTGRAGR TEPGICCRLW
AKEEEKGMRP HIRPEILDAD LTGLLLQLAA WGASDPSAMP WLDAPPLPHL AVARQCLELL
GAFTPAGKPT DLGLRMAALP LEPRSARMLL WGAQHGHGPL ACCLAALLEE RDPLANTQRP
EKRGQWGWRQ TDSDLALRLD WLCRSPHQGA TAPAREHARQ RVRRQSLRLT RLLAQIMKTD
HDPSPIPDHK QNAASGLFAD ALADVSALGL LTAVAWPEYV AMLQPGGQKG DIGAPMRTYL
MRSGRAARLL QTDSLARSEF LAVAQVDGTL PHGRIRLAAA LSGTDMEELF SSQAVQTDIT
CVTEAGQVTA RRQRRLGAIV LEDIPLPRPE PEHIVAALCA HVRERGLTCL PWNVQSLQWR
ARVALLHELE PDAWPAVSDA ALLGSLEAWL GPFMTNCTSL AALSAETFSA ALHSLLLGNG
GRLLDRLAPT HWQAPSGAQR PITYGEEGGP ALDVKLQEMF GCVDTPCIAG GRVPLLLRLN
SPAGRPLQVT RDLAHFWRNG YPAVRGEMRG RYPRHPWPED PLTATATALT KKKLAASGKK
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