Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1294 |
Symbol | |
ID | 7284986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1526538 |
End bp | 1532231 |
Gene Length | 5694 bp |
Protein Length | 1897 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643582100 |
Product | alpha-2-macroglobulin domain protein |
Protein accession | YP_002479875 |
Protein GI | 220904563 |
COG category | [R] General function prediction only |
COG ID | [COG2373] Large extracellular alpha-helical protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.448115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCAAA AATATTTTGT ATCCGGCCTT GCCCTTTTCG GCCTGCTTTT ATGTACTGCC GCCGTGGCTC TGGCCGGGCC TGCCTATCGG GTTGCGCGAA CCAGCCTGCC TGAAGAAGAC AACTGGCGGC AGGCAGAAGG GCTGTCCATA AGCTTTGACG TGGATGTGGA GCGCTGCAAA AAACAGTACG GCGCGGACTG GTCGCGCCAG TGCTCCGGCC CGCCCGCCGG GCAGCCCGGA ACACTGGTGG AAGGGGTACG CATGACCCCG GAAACGCCGG GTGAATGGCG CTGGCAGCAT GGGTCGAGCA TGACCTTTAC ACCTGAAAAA CATCTGCGCC CGGAGACCAC CTACACAATC TCCCTTGAAA AGGTATCCCT GCCGTCGCGT TTTTCGGTCA ACCGTCAGCT AACATACACT ACGCAACCCC AGGCCGCGCG AATCGGCAAG GAAACGTTCT GGACAGATCC TTCTGCAAAG GGGGCTCACG CCATTTCCGT GCCTGTGTAT TTTATATGGC CGGTCAATCC GCAAAATACG GAAAAAGACA TCAGCCTTCG GGCCAGTAAT ACCAAAAGTG GCTTGTCTTT CGGTGCGCCG CGGTTCATCT GGAATGAAAG ACGTACTGAA GTGGTGGTTT CCGCCCCGGT CATGTCCCTG CCGGGGGACA ACGCCGCTGC TGTGCTGCGT GTGCAGGGAC TGCCCGGCTT TATTGAAAAA GACGGCAAGC GTATTGTCCG GCTCGCCGGA AAAGCCGGTG CGGGAAATGT GGAAGCGCTG TTTGCAGTGG TCGGTCGCGA CCGCATCATG AATATTCAGG ATGTGACCGT GAAAACCGCG TACGGTCAGA GTCTGGAAAA AGAATTTCAT CTGGTTGTGA AAACCAGCCT GCGTGTCCTG CCTTCAGAAC TGCTGCGTCA CCTTGAGGTG GTCCAGTTAC CCGAAAAAAT CACCCCGGAG GCTGGGCAGG AAGCCGACTG GACAAAAATG CCCGCCATCA GCACCAACGA CATCAAGCGG GGCGAAAAAC TGCAACTGCA GCTTCTCCAG CCAGCAGATG AAGCCTCGGA TACCATTACG CTGCGCATAC CGGCAGGTGC GGGACGCGGG CTGCTGGCAT CTATAAAAAG TGGACTTGTG TCCACAGGGG GGCTGTCGCT CACGGAGGCG CGCCGCTTCA TACTCACCGC GCCTCCTTTG GGCGCTGAAC TGGCGTTTCT GCAACCCGGC AACATACTCA CACTCAGCGG CGACAAAAAA CTTGATATTT ATGCCGTAGG CCTGACCGGC ATAGAGTGGC GGGCTGAACG GGTGCGCGAT CCTTTTCTGG CTCTTTTGGC AAAAGATTCC GGATTTGAAG AAAATGCATC GGACTTTACT GTTATGAGCG ATGCTGTTCA GGGCCATCTG GACATGCGCG GTTTGGGCGG CACGAAGATG CCGGGAGAAG CCTTTTTTGG CGTTCTGGAT CTGGCGCCTC TTTTGCGCGG CCAGAATGGT CCGAAACACG GCCTTATGCG TATGACTGTT ACGGGGCACA AGGCAGACAG ACAAGTGGCC GAAGTTTCGC GCCTGTTGCT TGTTACTGAT ATGGGGCTGA GTGTAAAAAC TGCTTCTGAC GGCACCCGTG CGGTATTTGT GCAAAACCTG GGTACCGGCA AACCTGCGGC CAATATCGAA GTACGCCTCT TGGGGGCTAA TGGACTGCCT GTATGCAGCG CGTTTACCAA CACACAGGGC AGGGCGGATC TGCCGTCCGT CGTGGGGCTT GAGCGTGAAA AACGGCCTGT GGCTGTTGTA GCGCTGGCTG CTGTTCCCGG TGGGCAGGAT ATGGCCTGGC TTTCTCTTGA CGACAACGCC CGTAATGTGG ACTACAGCAG CTTTTCCGTG TCCGGACGCC ACGCCGCGGG TAATGGCCTG AGTGCTTCTG TCTTCAGCCA GCGCGGCCTG TATCTACCCG GAGAAAAATT GCATTTCGGC TGCATCGTGC GCCGGTTCGA CTGGCAGCCA CTGCCGCAGG ACCTGCCTCT GGAGGCGGTG CTTGTCAGCC CCACCGGTGC CGAAGTCATG CGCCGTCCGT TCACATTGGG GGCTGAAGGC TTGCAGCACT TCACCTGGAA GAGCACCGAA GACGCCGCCG TGGGCCAGTA TCGCCTGGAC ATCCGCCTGG CTTCGGGCAA GCCCGGTTCC GGCGCAAGCG GTCCTGTGCT CGGCGGAACA TCCACACGTG TCGAAGAATT CCAGCCCGAC ACACTGGCCC TGTCCACTTC TTTTGAGCCG GTCGCTCCCA AGGGATGGAT CCGCACGGGC ATGGGGGCTT CGCCTGCCGT GGCCGTCGCC AGGCTGGACA ACCTTTATGG CGAACCGGCG GCCGATCATC GTATCCAAAC GGCCTTTCAT GCCCGCAAGG GAATGCTGCG TTTTCCGGGA TACGAAGATT ATGCTTTTTA TGACGCTTCG CCTTCCGGTG CGCAGGATCA GTACATGGAT TTGCCCGATG CCTTTACCAG CAGCAAGGGC ATTGCCCGTT TGCCTCTTCC TCTCGACAGG CTTCAGGGAA ATACTTTTTA CGGAACCCTG ATGATCGACG GCTTTGAACC TGAAGGGGGC AGGGCGGTGA CCCGCCAGTT GTCGGCCCTG TTTTCGCCTC TGGAGGTGGC TCTTGGCTAT AAAGGAGAAG AGCAGGCCAA CAATCTGGAA TATGTGCCGC AAAATTCCCG CGCCTCGTTG CGCCTTGTGG CGGTCAACAA TGACCTTGCG CCGGTTGCTC TGCGTGATGC CGAGATTGTT TTTTCGGCCC GGCGCTACGT CAACAGCCTG GTTACTGACG CCCGGGGCGA ATACCATTAT GACGCCACCC CCGTGGATAC GGAAATAACA CGACAGACTG TGAACCTGAG TCCGCAGGGT TTGTCCTGGC CCATGCCCAC GTCCGAGGCC GGCGATTTTC TTGTGACCGT GCGCCAGGCA AACGGCAACA TACTGGCGCT TATTCCGTAT TCTGTGGCAG GCAACAGGCT GGCGGATCCG TCCGGACTCT CCACTGCGTC GCTGGCAAAG GGCAACCTGC GGCTCAAACT TGAAAAAGAG CATTATCAGC CCGGCGAAAC CATAAAAATG AGCCTTTCCA CGCCTTACTC GGGAACCGGG CTCATTACCA TTGAAAGGGA AAATGTACTG GCTCATGCGT GGTTTACGGC ACAAGCCGGA GAAAGCGTAC AGGAGATACA GATTCCCGAA CAGTTTGAGG GGCGCGGTTA TGTCAACGTG TCCTTTGTCC GCTCTCTGGA TTCAGAGGCT GTGTATATGA ATCCCCATAC GTATGGGGTG GCGCCGTTTA CCGTCGGCAT GAACCGGCGT GATATGGGTT TGAAAATCAC TGCCCCCGAG CGGGTGTTGC CCGGCGAAAA GGCAACAGTG CGCCTGACAT CGCGCATACC CGGCAAAGCT GTGCTTTTTG CGGTTGATGA GGGCGTGTTG CAGATCACCG GCTTTGCCAC GCCGGATCCG TTGCGTGAAC TGCTCGGAGA CCGCGCTCTT GATGTTTCCA CCATGCAGGC TCTTGACCTT CTTATGCCTG ACCATGCAAG ACTGCAGGGG CGTATTCCCG GTTTCGGCGG GGATATGGCC GGTGCGGGGG GGCGTTTTCT CAATCCGTTC AAAAGGCGTG GCGAACCCCC TTTTGCTTTC TGGCAGGAGG TAAGCGCGGT CAGCGCTGAG GGAACAGAGA TCAGCTTTGA TGTACCCGCG TATGTGAGCG GCCGCATTCG GATTATGGCT GTCGGCAGTA CTCCGGTCCA CGATGGACGG TCCACTGCGG GAAGCGCCCG TGCAGATATG GAGGTACGGG GTACGCTTAT CCTGAAGCCG CTTCTGCCTC TGGCCGTGGC GCCAGGCGAT GAGTTTGACG CCGCGCTGGT CATAGCCAAT ACGATAGAGG GCAGCGGCAA GGATGCCAGG GTGTCCGTAA CTATGGATTG CGGACCGGAG CTGGTTTTTT TGAGCGGACA GAAGCCGCAG CCGGTTGCTG TCAATGAAAA TGGCGAGGCA GTATTGCGCT TTCGTATGCG GGCGCAGGAC GTGCTGGGTT CCGCCGATGT TCGCTTTACC GCTACGTTGG CAGGAAAAGA AAAAGCGGGC AGCAGTATGC GCAGGCAGAG CCTGTCTGTG CGTCCGCCCG CGCCGCGGAT TCGTACGGAG AAGGTCGTTG CTCTTGATGG CGATATGGAC ATACCTGTAA ACCGTGATCT TTATCCTTAC GAGGCCCGGG GGCAGGCCAC TGTATCGGCG CTGCCCGTTC TTGGCTTGCG CGCATTGCTG GCGCGTCTGG ATACCTATCC TTACGGTTGC ACCGAACAGC TTATCAGCCG GGCCATGCCG TATGTGGCCC TGCTTGCCGT GCCGGAATTG CGCAAACAGG CGCTCAGCAG CCCGCGTACT TCTCCAGAAA TACTTGCCAA GCGCGGCAAT GCCGTTATCA GCGCCGCACT GGATACCATA CGCAGCAACT TCAGCTATTA TGAGGGGATA AGCCTCTGGC CCGGGTCCCC GACCAATGAT TTTGTTACCG CCTATGCCGG GGACTTTCTG CTCACCTTGC GGGAAAGCGG CGTTGTCTCG CCTGAAGGAT TGACAAGAAA TATTCTTGAT TCGCTCGAGA ACACGGTACG GCGTTCTCCG GTTGATGCAA ACGACGGGCG CATCAAAGTC TATGGGGCAT GGGTTCTGTT ACGTGACGGG CGCATCATGA CGCAGGAAGT GGAGCGGCTG GAACAGTGGT TCAGGGAAAA TACCGATGGC TGGGAAAGTG ATCTGGTGGC CGTGCTGCTG GCCGATTGCT ACGACATGCT GCGTTTGAAG CGCCGCGCAG AGCAACTGAT GCCTTCGGCG TTCATTGCGG CAACAGGCGA CTCCATGCTG GGGCAGGGCG CAGCGGCGGC CTTGCATGCG GCTGTAGTCT TGCGGCATTT CCCTGAAAAG CGCCAGCAGG TGAATACGGA TGCTCTGTTG GATGAAGCTT TTAACACTGC TGCAACCACA GTGGACATGG GGCTTATTTC CCGTGCGCTG GTCATGCTGG CGGGACAGGA TGCGCCCGCT CCCGAAGGGA TCTCCCTGGC TTGCACAAGC TATGCCCAGG GATTTTCCGC ACTGGAACCA CAAGACAGCG TGGGGGCATC TGTCCTCACG CTTGATGCTC CGGGCTGCCT CAATTATCGG GCAAGCGTGC CAAAGGGCGA CAAGGGCTGG AATCTGCATG TGGCGGCCGA AGGCTTTGAA CGCAAGCCGC TCACCCCCGC CTCCAGCGGC CTTGAGTTGC AGCGGCGCTA CGTCAACAGC AGGGGAGAAA ATGTCACCAG TGCCAGACTT GGCGAAGTGC TTACTGTGGA GTTGAGTCTG CGCTCGCCTG CCGAGTTCAC CAATGTGGTC GTGGTGGACT TGTTGCCGGG CGGATTTGAA CCTGTACTGG AAAAATCTGA ATCCACGGAG CCACAGGAAG GACTCATCCG TCACGAGCGG CGTGAGGACA GAGGAATCTT TTTTGTAAAT ACAGGTCCGC AGGCACGTAC TTTTACCTAT AAGGTCAGGG CCGCCACCCG CGGTCGTTTT GTGCTGCCCT CGGCCACGGC TGAGGCCATG TACGAGCCTG CTACCAATGC CCGCCTGGGC GGTGGGCATG TGAATATCGA ATAA
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Protein sequence | MFQKYFVSGL ALFGLLLCTA AVALAGPAYR VARTSLPEED NWRQAEGLSI SFDVDVERCK KQYGADWSRQ CSGPPAGQPG TLVEGVRMTP ETPGEWRWQH GSSMTFTPEK HLRPETTYTI SLEKVSLPSR FSVNRQLTYT TQPQAARIGK ETFWTDPSAK GAHAISVPVY FIWPVNPQNT EKDISLRASN TKSGLSFGAP RFIWNERRTE VVVSAPVMSL PGDNAAAVLR VQGLPGFIEK DGKRIVRLAG KAGAGNVEAL FAVVGRDRIM NIQDVTVKTA YGQSLEKEFH LVVKTSLRVL PSELLRHLEV VQLPEKITPE AGQEADWTKM PAISTNDIKR GEKLQLQLLQ PADEASDTIT LRIPAGAGRG LLASIKSGLV STGGLSLTEA RRFILTAPPL GAELAFLQPG NILTLSGDKK LDIYAVGLTG IEWRAERVRD PFLALLAKDS GFEENASDFT VMSDAVQGHL DMRGLGGTKM PGEAFFGVLD LAPLLRGQNG PKHGLMRMTV TGHKADRQVA EVSRLLLVTD MGLSVKTASD GTRAVFVQNL GTGKPAANIE VRLLGANGLP VCSAFTNTQG RADLPSVVGL EREKRPVAVV ALAAVPGGQD MAWLSLDDNA RNVDYSSFSV SGRHAAGNGL SASVFSQRGL YLPGEKLHFG CIVRRFDWQP LPQDLPLEAV LVSPTGAEVM RRPFTLGAEG LQHFTWKSTE DAAVGQYRLD IRLASGKPGS GASGPVLGGT STRVEEFQPD TLALSTSFEP VAPKGWIRTG MGASPAVAVA RLDNLYGEPA ADHRIQTAFH ARKGMLRFPG YEDYAFYDAS PSGAQDQYMD LPDAFTSSKG IARLPLPLDR LQGNTFYGTL MIDGFEPEGG RAVTRQLSAL FSPLEVALGY KGEEQANNLE YVPQNSRASL RLVAVNNDLA PVALRDAEIV FSARRYVNSL VTDARGEYHY DATPVDTEIT RQTVNLSPQG LSWPMPTSEA GDFLVTVRQA NGNILALIPY SVAGNRLADP SGLSTASLAK GNLRLKLEKE HYQPGETIKM SLSTPYSGTG LITIERENVL AHAWFTAQAG ESVQEIQIPE QFEGRGYVNV SFVRSLDSEA VYMNPHTYGV APFTVGMNRR DMGLKITAPE RVLPGEKATV RLTSRIPGKA VLFAVDEGVL QITGFATPDP LRELLGDRAL DVSTMQALDL LMPDHARLQG RIPGFGGDMA GAGGRFLNPF KRRGEPPFAF WQEVSAVSAE GTEISFDVPA YVSGRIRIMA VGSTPVHDGR STAGSARADM EVRGTLILKP LLPLAVAPGD EFDAALVIAN TIEGSGKDAR VSVTMDCGPE LVFLSGQKPQ PVAVNENGEA VLRFRMRAQD VLGSADVRFT ATLAGKEKAG SSMRRQSLSV RPPAPRIRTE KVVALDGDMD IPVNRDLYPY EARGQATVSA LPVLGLRALL ARLDTYPYGC TEQLISRAMP YVALLAVPEL RKQALSSPRT SPEILAKRGN AVISAALDTI RSNFSYYEGI SLWPGSPTND FVTAYAGDFL LTLRESGVVS PEGLTRNILD SLENTVRRSP VDANDGRIKV YGAWVLLRDG RIMTQEVERL EQWFRENTDG WESDLVAVLL ADCYDMLRLK RRAEQLMPSA FIAATGDSML GQGAAAALHA AVVLRHFPEK RQQVNTDALL DEAFNTAATT VDMGLISRAL VMLAGQDAPA PEGISLACTS YAQGFSALEP QDSVGASVLT LDAPGCLNYR ASVPKGDKGW NLHVAAEGFE RKPLTPASSG LELQRRYVNS RGENVTSARL GEVLTVELSL RSPAEFTNVV VVDLLPGGFE PVLEKSESTE PQEGLIRHER REDRGIFFVN TGPQARTFTY KVRAATRGRF VLPSATAEAM YEPATNARLG GGHVNIE
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