Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1277 |
Symbol | |
ID | 7284969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1504713 |
End bp | 1506155 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643582083 |
Product | MATE efflux family protein |
Protein accession | YP_002479858 |
Protein GI | 220904546 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCAGA AATATTTTTC TTTTGCAGAA GCCCGCCGTT TTTACAGTAT CGGCCTGCCG ATTTTTATTG CGCAGCTTTC ACAGACCGGC ATGACATTTG TTGATACCGC CATGGCCGGG CAGTATAGCG CCGAGCACAT GGCCGCTGTG GCCGTTGGCA GCAGCGTATG GGTTCCCATA TCCTTGTTGG GTATCGGTTG CCTGCTGGCC TTGCCGCCCC TGAGCGCACA GGTTGTCGGG GCGGGCAGAC CTGAAAAGGC GGCCCATTTA TTGCGGCAGG GCTTGTGGCT GACCTTGGGG CTGAGCATCG TTCTGATGAG CCTTTTTTAT ACAATTTCTT GGAATATGGA ATCATTTGGC CTGAATCCGG AAATGGCGCA CATTTCCGGA GGCTTTTTGC GGGCCATCAT GTGGGGGCTG CCGGGCTTCA TGCTGTTTGT GAACTTGCGC AGTTTTCTTG AGGGCTTTGC CCGCACCCGG CCAGCCATGA TCATCGGTAT GCTTGGCCTG ACCGTAAACA TACCTTGTAA TTTTATCTTT ATTTACGGCA AATTCGGCAT GCCCGAACTG GGCGGCGTTG GTTGTGGGGT AGCTACGGCC ATAAGTTTTT GGTCTATGGC ACTGGGTATG TTTTTTTATT TGCACCGGGA CCCGCAATGT GCCCAGGTGC GCCCGTTATT TATGCCACTT TGGCGTAACT GCAGAAAAAC GGGTGAAAAA CCTGCCCGGG AAGCACAGGA AAACTGCCTG CCGCGTTTTG ATGCACCCCT GATCTGGCGG ATTTTACGCA TCGGCATGCC TGGCGCTCTG GCCTTGTTCT TTGAGGTTTC ACTTTTCGCT CTCAGCGCCA TCCTGCTGGC CCCCTTGGGG ACCATTATGG TGGCTGGACA CCAGATCGCC CTCAACTTCG GTTCACTGGC CTTTATGGTT CCGCTTTCTC TTTGCATGAC CGTGACGATC CGCGTGGGCC GCTGCCTGGG CGCACAGGAC CTGGAACGAG CCAGAATGGC CGCGCGTACG GCCCTTGTAC TCAGCGTTGT TTTTGCCCTG ATAATTGCTG CCATCACCAT ATCGTTCCGG CAGAATATCG TGCGCATTTA TACGGACAAT CCGGAAGTAA CTGCTTTGGC CATGCACCTG TTGCTTTTTC AGGCGGCCTA TCAGGTGGTG GATGGCCTTC AGGTCACAGG TATAGGAATT TTGCGGGGCT ATAACGATAC ACGTGTTATT TCCGTCATCT GTTTTATTGC CTACTGGGTC ATTGGCCTGC CCCTGGGCTT CACGCTGGCA CGCACCAATA TTATTGTGCC GTATCTGGGA GCTGAGGGTT TCTGGATTGC CTATATTGTA GCTTTGGGCT TCGGCGCTCT GTGCTACCTG TCGCGAGTGC GCTTTCTGCA CAGTCTTGCA CCGCAGGTGG TGTTCAGCCG CATAAGGCGA TGA
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Protein sequence | MFQKYFSFAE ARRFYSIGLP IFIAQLSQTG MTFVDTAMAG QYSAEHMAAV AVGSSVWVPI SLLGIGCLLA LPPLSAQVVG AGRPEKAAHL LRQGLWLTLG LSIVLMSLFY TISWNMESFG LNPEMAHISG GFLRAIMWGL PGFMLFVNLR SFLEGFARTR PAMIIGMLGL TVNIPCNFIF IYGKFGMPEL GGVGCGVATA ISFWSMALGM FFYLHRDPQC AQVRPLFMPL WRNCRKTGEK PAREAQENCL PRFDAPLIWR ILRIGMPGAL ALFFEVSLFA LSAILLAPLG TIMVAGHQIA LNFGSLAFMV PLSLCMTVTI RVGRCLGAQD LERARMAART ALVLSVVFAL IIAAITISFR QNIVRIYTDN PEVTALAMHL LLFQAAYQVV DGLQVTGIGI LRGYNDTRVI SVICFIAYWV IGLPLGFTLA RTNIIVPYLG AEGFWIAYIV ALGFGALCYL SRVRFLHSLA PQVVFSRIRR
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