Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1215 |
Symbol | |
ID | 7284897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1428419 |
End bp | 1429255 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643582014 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002479797 |
Protein GI | 220904485 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTCCCC GCGCTGTCAA AAATGCGCTT GGGCGTCATG CCATGCTGCT GATCGGGCTT TTTATTGTCC TTGGCATGTC CCTGGCCGCC CTGCTGGCTC CGGCCCTCGC GCCGCATAAT CCGGATACGC TGCATCTGAA CAACATTCTT GAACCGCCCT CTTCCCGGTT CTGGCTTGGA ACAGACAGGC TCGGTCGCGA TGTTTTTTCA CGTCTGCTTT ATGGCGGGCG GGTGTCTCTA TGGGTCGGCT TTGTGGCTGT GGGCATCTCC ATCAGCATCG GCACCACGCT TGGCCTGATA AGTGGGTATT TTCGACGGTG GGTGGATGAA ACAATCATGC GTATCGTTGA CATAATGCTC TGTTTCCCCT CATTTTTTCT TATTCTAGCT GTCATTGCCT TTCTTGAGCC CGATCTTACA AATATCATGA TCGTCATTGG ACTTACCTCA TGGATGGGCG TTACGCGCCT CGTTCGCGCT GAAGCTTTGA GTTTGCGCGA ACGCGAATTT GTGGATGCGG CTCGCCTGGC AGGAAGTTCC ACAAAAAAAA TACTTTTTTA TCACATTTTA CCCAATGCCT TGGCGCCGGT GCTTATAACC GCTACTCTTG GTGTAGCCGG AGCCATCCTT GTGGAATCAA GCCTGAGTTT TCTCGGTCTT GGCGTGCAGC CACCCACGGC AAGCTGGGGC AATATGCTTA TGGAAGGTAA AGCCGTGATC GAGAGCGCCC CTTGGCTGTC GGTTTATCCT GGATTGGCCA TTCTTGTGAC GGTGCTCGGC TATAACCTGC TTGGTGAAAG TTTGAGAGAT ATTTTCGATC CCAGGCTGCG GCGCTGA
|
Protein sequence | MLPRAVKNAL GRHAMLLIGL FIVLGMSLAA LLAPALAPHN PDTLHLNNIL EPPSSRFWLG TDRLGRDVFS RLLYGGRVSL WVGFVAVGIS ISIGTTLGLI SGYFRRWVDE TIMRIVDIML CFPSFFLILA VIAFLEPDLT NIMIVIGLTS WMGVTRLVRA EALSLREREF VDAARLAGSS TKKILFYHIL PNALAPVLIT ATLGVAGAIL VESSLSFLGL GVQPPTASWG NMLMEGKAVI ESAPWLSVYP GLAILVTVLG YNLLGESLRD IFDPRLRR
|
| |