Gene Ddes_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1214 
Symbol 
ID7284896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1427385 
End bp1428419 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content56% 
IMG OID643582013 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002479796 
Protein GI220904484 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCCCC TGCCCTCACA TGCCCGCCGT CACGGTCGGC TGACCGCTAT CGCTGCCAAC 
GTCGCACGCA AGACGTTGTG GATGTTGCTG GTCCTGTGGG GGATTACGCT TATCAGCTTC
TGGGTCATTC ATCTGGCTCC AGGGTCTCCT ACGGATATGG AGACAACGCT CAACCCCCTC
GCAGGCGAGG CTGCCCGGCA AAGGCTTGAA GCGCTGTACG GACTTGACCG CCCGCTTCAC
GTCCAATATG CAGACTGGCT GCTGCGCTTG CTGCATTTTG ACTTCGGCAA CTCCATGTCT
GCTGATTCAC GACCCGTACT GACCAAGATT ATGGAGCGCC TGCCCCTCAC AGTGGGCATG
AATGTCACCG CCATGGTGCT GACTCTGCTC ATTGCCATAC CGGTGGGAAT AATTTCGGCC
TGCCGCCGCA ACTCTCTGCT GGACCGCTCT GTGACCGTGC TGGTTTTTCT GGGCTTTGCC
ATGCCTTCAT TCTGGCTTGC GTTGCTGCTC ATGTTGCTGT TTGGCATTGA GTTGCAATGG
TTACCCATCT CCGGCCTTAC ATCCATGCAC TATGAGCAGC TGAGCCTATG GGGAAAGTTT
TGTGATCTGG CAAAACATCT GGCTCTGCCC ATACTTGTCT ATACCGTGGG CGGTCTTGCG
GGCATGTCAC GCTATATGCG GGCGTGCATG TTGGAGGTTC TTCAACAGGA TTACATCCTT
ACGGCACGGG CCAAAGGCCT TGGCGAAAAG GCCATTATCT GGCGTCACGC GCTGCGCAAT
GCGCTATTGC CCGTCATTAC CCTGCTGGGA CTTTCAGTGC CTGGACTCAT CGGCGGCAGC
GTCATTATTG AGTCCATTTT TGCCCTGCCC GGCCTCGGTC AGCTCTTTTA TGCAGCTGTT
ATGGCCCGGG ATTACACTAT GATTATGGGC AACCTTGTTT TGGGGGCCGT GCTTACCCTC
TTTGGCAATC TGCTGGCCGA CATCTGCTAT GGCCTGGCTG ACCCGCGTAT ACGCAGTGCA
AAGGATAACG CCTGA
 
Protein sequence
MPPLPSHARR HGRLTAIAAN VARKTLWMLL VLWGITLISF WVIHLAPGSP TDMETTLNPL 
AGEAARQRLE ALYGLDRPLH VQYADWLLRL LHFDFGNSMS ADSRPVLTKI MERLPLTVGM
NVTAMVLTLL IAIPVGIISA CRRNSLLDRS VTVLVFLGFA MPSFWLALLL MLLFGIELQW
LPISGLTSMH YEQLSLWGKF CDLAKHLALP ILVYTVGGLA GMSRYMRACM LEVLQQDYIL
TARAKGLGEK AIIWRHALRN ALLPVITLLG LSVPGLIGGS VIIESIFALP GLGQLFYAAV
MARDYTMIMG NLVLGAVLTL FGNLLADICY GLADPRIRSA KDNA