Gene Ddes_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1157 
Symbol 
ID7284839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1365895 
End bp1367040 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content57% 
IMG OID643581956 
Productglutamate synthase alpha subunit domain protein 
Protein accessionYP_002479739 
Protein GI220904427 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0070] Glutamate synthase domain 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000112739 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGAA TGAACACGCT GCACAATCAT GAACGCATGT CCACCCAGGA TCTTTTGCTG 
GCCATTGAAG CCGCAGTTGA CAGGGGAGAG ACAGCTTTTC ACATAGAGGC TTCGGGGCAG
CATGATATCG GCGGCCCCTT ATGGAACAGA GACGGCAAAA AGCTCATGTT TACCGTGAGA
AATCCCGGGC AGCGAGTGGG ATCCATGTGT CTGCCTGATA CGGAAGTACT GGTTGAAGGT
TCGGCCTCCG CTGACGTCGG ATGGCTCAAC GCGGGCGGGC GCATTACTGT ACGCGGTGAT
GCGGGCGATA CTGCGGGGCA TTGCGCGGCT GCGGGCGTAA TTTATATTGG TGGGCGTGCC
GGCGCGCGTT CCGGGTCGCT TATGAAACAC GACCCCATGT ACGAGCCGCC GGAATTATGG
GTGCTCAAAA GCGTGGGCAG CTTTTCCTTT GAATTTATGG GAGGAGGCAA GGCGGTGGTT
TGCGGCTACG AAAGCCAGAC CATGCCGTCC ATTCTTGGTG AAAGGCCCTG TGTGGGCATG
GTGGGCGGAG TGGTGTATTT TCGTGGCCCC GTGAGCAGCC TTCCCCCTGA TGTGCGTGTG
TGTGCGCTGA ACGACGACGA TGTTACGTGG CTGGAAACTG GTCTGGAAGC ATTTTTAGCC
GCCATTGACA GGCCGCGCTT ACGCAAAGAA CTTTCCGTGT GGAAACACTG GCAAAAAATC
ATTCCATTGC CCCAGGAACA GCAAGCGTGC CAAAGCACTT TTTGCATGGC GCAATTCCGC
GCCGGGGAGT GGATTGAAAA TGGCATCTTC AGTGATGTGG CTCCGGATGA TTTTACCGTT
AACGGACTCG TTGCCGTGGG AGATTACCGC CTGCGCGTAC CTGTGTGGGA AAATTCCGGA
TGCACCGGGC GCGGTTCGTT CGATAATCCG TCCGCCCGTC TGCTGCCCGG AGCCGGGGCG
TGTCGTGATT GCAAAATATG CCTCAAATTC TGCCCGCAAA AAGCCATCAC CCGCAAACAG
ACCGATGATA ACGTGGCCTA CGGCGCCGAT TCCGGGTGCT GCACAGGTTG CGGTATCTGC
GCGGCGGTTT GCCCTTGCGG CATCTGGCAT ATGCATTCCA ACCGGGATAT GCTTCAGGGA
GAATGA
 
Protein sequence
MLRMNTLHNH ERMSTQDLLL AIEAAVDRGE TAFHIEASGQ HDIGGPLWNR DGKKLMFTVR 
NPGQRVGSMC LPDTEVLVEG SASADVGWLN AGGRITVRGD AGDTAGHCAA AGVIYIGGRA
GARSGSLMKH DPMYEPPELW VLKSVGSFSF EFMGGGKAVV CGYESQTMPS ILGERPCVGM
VGGVVYFRGP VSSLPPDVRV CALNDDDVTW LETGLEAFLA AIDRPRLRKE LSVWKHWQKI
IPLPQEQQAC QSTFCMAQFR AGEWIENGIF SDVAPDDFTV NGLVAVGDYR LRVPVWENSG
CTGRGSFDNP SARLLPGAGA CRDCKICLKF CPQKAITRKQ TDDNVAYGAD SGCCTGCGIC
AAVCPCGIWH MHSNRDMLQG E