Gene Ddes_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1056 
Symbol 
ID7284738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1236659 
End bp1237627 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content58% 
IMG OID643581858 
ProductMammalian cell entry related domain protein 
Protein accessionYP_002479641 
Protein GI220904329 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGC AAAAATACAG AACCACTGTG GGAGCCTTTG TGCTTGGCGG GCTATCCCTG 
CTGGCTCTGG GATTCATCGT ACTGGGCGGC GGCCGTCTGT TCAGCAATGA CATGCAGTAT 
GTTCTCTACT TTGACGGCTC TGTGAGCGGC CTTTCCACGG GAGCCCCCGT TGTGTTCCGC 
GGTGTTCCCA TGGGCAGCGT CACCCGCATC AACCTTGTGG CCAACACAAA AGACTCCAAT 
GTCACCATTC CCGTCTATAT CCGTATAGAC GAACAAAGCT TTGTGCGCGC CCGCGGCTCT 
GCGCCCATTT CGGAATCAGT CCGGGAAGAA ATCGTCCGCC GCATGGTGCA GCGGGGCCTT 
CGTGCCCGCC TGCAACTACA AAGCCTTATC ACCGGACAAT ACCGGATCGA GCTGGACTTC 
TTTCCCGGCA CGCCCGCTGT TTTCCGTTCC GGCACACCCG ATACGGAAAT TCCCACCATC 
CCCTCCCCCA TTGACACGCT GCAAACCACC CTGGCGCAAC TGCCGCTGGA ATCCATGGCC 
CACGCACTTG AAGCCATCCT GCAAAGCCTG GCCCATTCCC TGGCGGACGA CAGCCTTGGA 
CGCGGCCTCA AAGCGTTTAC GCGCACGTTT GAAGAAGTTG AAGACGTCCT CAAAAACAGT 
TCCATGCGGC AAAATGCCGA AAGCATCCTG AAAAAGCTCA ACACCGCCGC AAGCACAGTT 
GAAGGGCAAA TGCCGGGAAC CTTTGTTACC TTGCGAGCCG CGCTGGAGAG CATGAGCCTG 
GCAGCGGACC AGCTGCGTGT AGTCACGGCC TCGGCCCAAA GCCTTGTGGG GCGTGACTCG 
CCCACCGTCA ACGATGTCCG CCGCCTGATC AGGGAAAGCA TTGAAACCCT GCGCACCATC 
CGCAACTTCA CACAGATGCT TGAACGCAAC CCCGAAGCCC TGCTTATGGG CAGACAAGGA 
AAACGCTGA
 
Protein sequence
MNAQKYRTTV GAFVLGGLSL LALGFIVLGG GRLFSNDMQY VLYFDGSVSG LSTGAPVVFR 
GVPMGSVTRI NLVANTKDSN VTIPVYIRID EQSFVRARGS APISESVREE IVRRMVQRGL 
RARLQLQSLI TGQYRIELDF FPGTPAVFRS GTPDTEIPTI PSPIDTLQTT LAQLPLESMA 
HALEAILQSL AHSLADDSLG RGLKAFTRTF EEVEDVLKNS SMRQNAESIL KKLNTAASTV 
EGQMPGTFVT LRAALESMSL AADQLRVVTA SAQSLVGRDS PTVNDVRRLI RESIETLRTI 
RNFTQMLERN PEALLMGRQG KR