| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1031 |
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| Symbol | |
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| ID | 7284712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1206783 |
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| End bp | 1207721 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643581832 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002479616 |
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| Protein GI | 220904304 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0169288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACGCT TTTTGTGCCG CCGCCTTCTT GTCCTGTCCC CTCTGCTGCT GGGAGTTTCT
GTTTTTGTTT TTGCCGTCCT GCGCCACGGT AAAACAGATC CGGCAATGGC ATATCTGCGT
TTGTCCGGTC TGCCGCCCAC TGAAAGCCTG CTGGCGACCA CCCGCGAAAG CCTGGGCCTG
AACCAGCCGC TCTGGAAGCA GTATCTGGAC TGGCTGAGCT CGGCCCTGCA AGGCGACCTG
GGCCTGTCCT ATGTCACAGG CAATCCGGCC CTCAACGAAA TCCTGTATTA TCTTCCCGCT
ACCATTGAAC TGACCATGTG GGCTATGGCC GCCACAATTT TCATCAGCGT TCCCCTTGGT
ATCGCGGCTG CTCTGTACAA AGACCGCTGG CCGGATCACC TTACCCGTAT TTTTGCGTTC
AGTGCCGTAT CCATGCCCTC ATTCTGGCTG GGTTTTCTAC TGGTGCTCCT TTTTTCGCGC
CATCTTGACA TTCTGCCAGC CATGGGCCGG GGCGGCCCGG AATTTCTGAT TTTGCCCGTG
TTCACGCTTT CTTTCATGTC TATGGGGATC AACATACGCC TGGTGCGAGC CAGCATGCTG
GAACACATGC ATAGCCGCAG CGTCATCTAT GCCCGCTCAA GAGGTTTGAA AAAATGGCGC
ATCATAGGCC AGCATGTGCT GCGCAATGCT TTTATTCCCG TCCTGACATC CATGAGCATG
CACTTCGGCG AACTGCTCGG CGGGGCTGTG ATTGTTGAAA ACATTTTCAA CTGGCCCGGT
GTTGGCCGTT ATGTGGTTTC TGCCATCTAC AATCACGACT ACCCCGTGAT CCAGACGTTT
ACACTGGTAA CCACCCTTAT TTTTGTGTTT GTCAACCTGC TTACTGATGT ACTTTACGCG
CGCATCGACC CGCGCATCCG CCTTGGAGAA GGACGATGA
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| Protein sequence | MIRFLCRRLL VLSPLLLGVS VFVFAVLRHG KTDPAMAYLR LSGLPPTESL LATTRESLGL
NQPLWKQYLD WLSSALQGDL GLSYVTGNPA LNEILYYLPA TIELTMWAMA ATIFISVPLG
IAAALYKDRW PDHLTRIFAF SAVSMPSFWL GFLLVLLFSR HLDILPAMGR GGPEFLILPV
FTLSFMSMGI NIRLVRASML EHMHSRSVIY ARSRGLKKWR IIGQHVLRNA FIPVLTSMSM
HFGELLGGAV IVENIFNWPG VGRYVVSAIY NHDYPVIQTF TLVTTLIFVF VNLLTDVLYA
RIDPRIRLGE GR
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