Gene Ddes_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0990 
Symbol 
ID7284670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1157491 
End bp1158627 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content61% 
IMG OID643581790 
Producttransport system permease protein 
Protein accessionYP_002479575 
Protein GI220904263 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGGTA AGAAACCTTG CGGCGACGAA AACAACACCG CACAGTCTCA CGCTTATTGT 
GGCAGCCCAG ACGGACGCCT CAGCAACAGC ACAGAAAAAC GTCACTGCTG CTCCCTGCCG
TGGGACAGCC CTTTCATGCG GGCCTGCACA GCAACGGCAC TGCTGGCCGC TGCCGTACTG
CTGGGGCTGA CGGGCATGAA GCTTGGGGCA GTCTCACGCT CCTGGGCCGA CATATGTTCG
GCCCTGTTCA GTCCTTCAGG CGATGAATCC TTACGCTATT TTGTGCTCCA CCTGCGGCTG
CCCAAAGTTT GCGCCGCCCT GACTGTGGGT GCATCGCTGG CTCTTGCCGG AACCATGTTG
CAAAACGTGC TCAACAATCC GCTGGCTTCG TCCTTTACCC TCGGCCTTTC ACAGGGAGCC
GCCTTCGGAG CCAGTTTTTC CATGATCATC CTGCCCGCCG CAGGCGGCCT GGCCGGCCTG
AGCATTGTAG CCATGGGCGC ACTGGCCGGC TCCCTCGGCG CGTCTCTGCT TATACTGGCC
TTCAGTATGG TGCGCGGCAT GGGGCCGCAG GGGCTTATAC TTGCGGGGGT GGCATTGTCG
ACCCTTTTCG GGGCCGCCAC CATGTCGTTA CAGTATTTCG CCACTGACAG CCAGGTGGCG
GCTACCGTAT TCTGGAGCTT TGGCGACCTG AGCAGAGGAA GCTGGCGCGA GGTCGCGCTG
GTAGGGCTTG TGCTGCTGGC AGGTCTTGCC TTTTCCCTGC GTCACAACCT TGACTACGAC
ACGCTGCGCT GGGGCGATGC CCAGGCCACG GCCCTGGGTG TACCTGTTCT GCGCCTGCGC
TGTGCAACCC TGTTCATGGC CTCGCTTATG GCCGCCTTTG CCACCGCCTT TTACGGCGTC
ATCGGCTTTG TGGGCCTGGT GGCTCCTCAC ATGGTGCGCC TGACATTTCC CCATGCCGGA
CATTTTTTTC TGCTGGGCTG CTCTGCCCTG TTCGGCGCAT GCTTTTTACT GGCGGCCGAC
CTTGTAGCCC AGACCATCAT ATACCCTGCC CTGCTGCCCA TAGGCATTGT CTGCGCTTTC
ACCGGAGTGC CCGTTTTTTT ATGCATCCTT TTCAGGGGGG CCAAAGCACA TGCTTGA
 
Protein sequence
MPGKKPCGDE NNTAQSHAYC GSPDGRLSNS TEKRHCCSLP WDSPFMRACT ATALLAAAVL 
LGLTGMKLGA VSRSWADICS ALFSPSGDES LRYFVLHLRL PKVCAALTVG ASLALAGTML
QNVLNNPLAS SFTLGLSQGA AFGASFSMII LPAAGGLAGL SIVAMGALAG SLGASLLILA
FSMVRGMGPQ GLILAGVALS TLFGAATMSL QYFATDSQVA ATVFWSFGDL SRGSWREVAL
VGLVLLAGLA FSLRHNLDYD TLRWGDAQAT ALGVPVLRLR CATLFMASLM AAFATAFYGV
IGFVGLVAPH MVRLTFPHAG HFFLLGCSAL FGACFLLAAD LVAQTIIYPA LLPIGIVCAF
TGVPVFLCIL FRGAKAHA