Gene Ddes_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0942 
Symbol 
ID7284622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1096777 
End bp1098807 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content55% 
IMG OID643581742 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002479527 
Protein GI220904215 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTGA GCCTTACCCA CAAATATGTC GGATCTCTGT TTTCAGCTCT CATTACCTGC 
TGTGCCGTTG TTCTGTTTGT ATCCATCTAC TATATGAAAA AGCCGATAGA TGAAGAACTG
AGCAACAGCA TACATCGCAT GCAGAATATC GTTCACTCCG CCAATGAGAT GACCATACAG
CGTTTTGCCC AGAACGCCGC CTTCATTGCC ACCAACGACC GGTTGGCCCG GGCCATGGCC
TATAAGGATC ACGACGAGGT ATTTACCCTT GCTGAAAAGG CCATGAAGAT GGCCGGATCG
GACTTTATGT CTGTAACAGA CGCCCAGGGG ATCGTTATTG CGCGTGGGCA TTCCAAAAGC
AAATTCGGCG ACAGTATCGC CAAACAGGAA ACAGTTGCCA AAGCCATGCA GGGAGTTCCG
GCGCAGGCTG TGGTGACCGG GCCGCTCAAT CCATTTACGT TACGCGCATC GCAGCCGGTT
CTTTATGAAG GGCAGCTGGT GGGAACCATC TCGATTGGCG TATCGCTTAC CGCTCCTGAT
TATCTTGACT GGCTGAGCCA GCTTGCCGGG GCTGCGGTCA CCATTTTCAA GGGTGATACG
CGCGTCATGA CAACCATTGT TTCTGACAGC AAGCGTGCCG TGGGTACAAA ACTGGAGGCG
CCGGATGTCA TCGACGCCGT ACTTGAGCGT GGCGAGACGG TTTTTGTGCA AAATACCATT
CTTGGTGTTC CGTATCAGTC TGCATACTGG CCGGTGAAGG CTGCCGATGG CAAGATTGTG
GGCATGTGGT TTACGGGAGC GCCAATTGGT GAACTGAAAA AACTTGAAAA TGAGGCCATT
GTCACGGCCG TCAGTGTGGC TGCTGCTTTG CTGCTGGTAC AGCTGGGCAT TTCAGTTTTT
GTCGGCTTGC GTGTAAGCGC GCCGGTTCGT AAAATAACCA GTTATGCGCT TGAGGTGGCC
GACGGCAAGC AGGACAGTGT ACTCACGGTA CGCGGCTCTG ATGATATGGG TATGCTCGCC
GATGCCTTGC GCAGCATGGA AAAAAATTTG CGAACACTGG TGTTTGAGGC GGCGGAAAAA
GCCAGAGAAG CCGAAAAGTG TGGCGAAGAA TGCAAGCTGG CGATGAATGA GGCAGAGCAG
GCCAAGGCAA AGGCGGAGCA GGCCAGGTGC GACGGCATGT CAAGCGCGGC AGCGCGCATC
GAAGAGGTTG CCGTCAAACT CGGCAATTCG GTTTCGGATA TTGCCGAGCA GGTGGAAAAT
ACCGATGTCG CCTTGAGCCG GGCTGTGTCC AGACTTGCCG AAATAGCTTC GGCTATGGAA
GAAATGAACT CCACCGTGCT TGCAGTTGCC CGCAATGCTG GCGGCGCTGC AGATATTTCA
GATGCGGCGC GCAATCTGGC AGAAACGGGT TCCAGCGTGG TTTCGCAGGC CGTATCCAGC
ATCCAGCAGG TACAGCAGCA ATCGCTGGGC CTCAAGGGCG GCATGACCCT GCTCGATGAG
CACGCCAGGG CCATCAGCCG TATCATGAGC GTCATTTCCG ACATTGCCGA CCAGACAAAC
CTGCTGGCCC TCAACGCGGC CATTGAAGCT GCCCGCGCAG GCGATGCCGG CCGAGGATTT
GCCGTTGTGG CCGACGAGGT GCGCAAGCTG GCAGAAAAAA CCATGACGTC TACTACGGAT
GTGGGCGATG CCATCCGTGC TATCCAGTCC AGCGCAGCGC AAAGCATTCA GCAGGTAGAT
GAAGCCGTGA ACAATATCTC TGTAGCTACA GAATATTCCA ATAAGTCCGG ACAATCACTA
CAAGAAATCG TGGGCATGGT GGACAAGACC GCTGACGAGG TGCGCGCCAT TGCCACTGCC
AGCGAGCAGC AGTCAGCCGT GAGCGACGAG ATCAACAAGT CCATCAGCGA CGTAAACTAC
CTGACCGGAA ACACCTCTGA GTCCATGAAG GTGGCTCTGC GTGAGCTTGA TGAACTGCGT
CATCAGACAC AGAGCCTTAT GGATCTGGTG GAAGCCCTGA AAAAATCCTG A
 
Protein sequence
MRLSLTHKYV GSLFSALITC CAVVLFVSIY YMKKPIDEEL SNSIHRMQNI VHSANEMTIQ 
RFAQNAAFIA TNDRLARAMA YKDHDEVFTL AEKAMKMAGS DFMSVTDAQG IVIARGHSKS
KFGDSIAKQE TVAKAMQGVP AQAVVTGPLN PFTLRASQPV LYEGQLVGTI SIGVSLTAPD
YLDWLSQLAG AAVTIFKGDT RVMTTIVSDS KRAVGTKLEA PDVIDAVLER GETVFVQNTI
LGVPYQSAYW PVKAADGKIV GMWFTGAPIG ELKKLENEAI VTAVSVAAAL LLVQLGISVF
VGLRVSAPVR KITSYALEVA DGKQDSVLTV RGSDDMGMLA DALRSMEKNL RTLVFEAAEK
AREAEKCGEE CKLAMNEAEQ AKAKAEQARC DGMSSAAARI EEVAVKLGNS VSDIAEQVEN
TDVALSRAVS RLAEIASAME EMNSTVLAVA RNAGGAADIS DAARNLAETG SSVVSQAVSS
IQQVQQQSLG LKGGMTLLDE HARAISRIMS VISDIADQTN LLALNAAIEA ARAGDAGRGF
AVVADEVRKL AEKTMTSTTD VGDAIRAIQS SAAQSIQQVD EAVNNISVAT EYSNKSGQSL
QEIVGMVDKT ADEVRAIATA SEQQSAVSDE INKSISDVNY LTGNTSESMK VALRELDELR
HQTQSLMDLV EALKKS