| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0922 |
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| Symbol | |
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| ID | 7284599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1075355 |
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| End bp | 1077937 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643581719 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_002479507 |
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| Protein GI | 220904195 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.226971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGT ATACGTTTTG GGCTAAAACA TATGCTTCAA ATCTGCCGGG GATATCAGTG
CTCCTGCATG GCAGGTTTGC CAGCGCTGTG GGGCGCTGCC TTGTACGGGC CATGTTTCCT
CCGCAGTGGC AAGATTTGCA TGCTGTTGTT GCCTTTCTGC TATCCATACA TGATGTCGGC
AAAATCAGCC CGCAATTTCA GGGCAAATGC CTTTTGTGGC TTGAGCAGAA CGGTCTTGCC
AGAGAGGCCG CAAACAATGC GTGGCCCAGT TTTACTACGA CACATGCCTG CCTTTCACAG
GAAATTCTTG ATTATTTTTG GCAACAAAAG GGGCTTCTGT CAGAGTCGTA CTCCCTGTGG
AGCGCCATCG TGGGCGCACA TCACGGCAAA TGGGCCAAGG CAAAACCGCA TCATTACGGA
CAGGTTTCAC CACCTTGCCT GGCCCCATCC CCATCAGTCG ACTGGCTGCG GGAAGAGCTG
AATTTTGTTG CCTATCAATG GGAACAGCAT GCCAATACAG AGCTGCCGCC TGTTACGGGT
GCAAGCGCCA GTCTTTACGC CTCAGCAGGA CTCCTGGTTC TTGCGGACTG GATAGCTTCT
GACGAGCACC ATTTCCCTGC AAACCCTACG CTTGCGCCCA TAGCTGATGA ACAGATCGAC
AGAGTGGCTC ATGATGTTGT TGGCAGTCTT GGTTTTGCTT CACTTGAAAT ACGCACCGGC
CTGAGCTTTG AAGATATCTT CGGCTGCTCA CCGTACCCCA TGCAGGTCGC CGCATGGTGC
AATATTACGG AGCCGGGGAT TTATGTCATT GAAGCGCCTA TGGGCATGGG TAAAACAGAG
GCTGCGCTTA TGGCTGCCTA CAAGCTTATG GAGCAGGGCA AGGCGCGTGG GCTGTATTTT
GGCCTGCCCA CACAGGCCAC AAGCAACAGG ATTTATGAAC GGGTACTGGA ATTCATACTG
CGAATATCGC CGACTGCGCA AAGGGTGCAG TTGATCCACG GCAACTCATG GCTCCTGGAT
GACACGCTTG CCATGCCAGA GCAGCAGCAA CTGCCTGATG ATTCCGCCGC AGATCCAAAA
GCAGGCTCCG GTGCCGATCC CTTGCGCTGG TTCTGTTCGT CCCGCCGGGC GTTGCTCGCT
CCCGTGGGGG TGGGCACGGC AGATCAGGCC ATGCTGGCTG CGCTGGCGGT AAAACACTTT
GCCCTTCGCA GGCTTGCCCT TCTGGGCAAA GTGGTCATTC TGGACGAAGT GCACAGCTAT
GACCACTACA CGAGAGCCAT CATACAGCAG CTTTGCAGGG TTCTTGCTGA TCTTGGATCA
ACGGTCATTA TCCTTTCCGC CACGCTTTCC GGCTCAGCCC GTTCGGCGCT TTTGCAGTCA
CACAGCCCTG TTTCCAGCAT GGGTGCAGAG GAGGACAGTC TGCCATATCC CTGCATCAGC
GGGCGCGCCC ATGATCAGGA TACCGTGCAG GTTATCCCTT GTACGCCGCC GCCTTCACAC
ACTGTTCATG TGGATTTTCA GCCACTACAG GGCGCCATCA GCCGCACAAT CGACATTGCA
GCCTCGGGCG GCCAGGTGCT TTGGGTCTGC AATACGGTTG CCAATGCTCA GGAGACGTTT
CGCAATATAC AAGCTCATGC AGCAGTTACA GACTGCCAGG CAGACATGGG CATTCTGCAT
GCCCGACTGC CGTTCTTTAT GCGCGAAGAG CGTGAAACGG AATGGATGCA GCGCCTGGGC
AAGAAAGGGC AGCGGCAGCG CGGATGTATT CTCGTCTCTA CGCAGATTGT GGAGCAGAGC
GTGGACCTGG ATGCCGATGT GCTGTTCACG GAGCTGGCCC CCACTGACAT GCTGCTGCAA
CGTATGGGCA GGTTATGGCG GCATACACGA CGCGACCGCC CGGTTCCCCA TCCCTGCATG
CATATTATTG CCGAGAATTT TTCCCTGACA GATCTGCTGG ATATGAGCGC GCCTGCAATT
ACAAAAGCGC TGGGCAGCAA AGCCAAGGTG TACGATCCGT TCATTTTATT GCGCACACTT
GAGGTGTGGG GCAAGGCTGT ATCGGTAACG CTCCCGGACG ACATCCGCAG GTTCATATAT
GCAACATACA CAGAACCTGA ATTTCTGACG GAAGCATTGC AGGAACTGTA TGACGCGCAG
TTTGGTAAAA GTGCAGCCAT GAAGATGCAG GCGCAAATTA ACACGGATAT ATGGCGACTC
GCTGGTACTG ATGTAGAAGA ATACGCGCCC ACAAGGCTTT CAGACCATCA GGAATACGGT
TTCGTTATGT ACCGTAGTAA TGTAAAAAAT CAGATAACAC TGCTTGATGG CAGTGTTGTT
AATGCCAATG ACAAGGACTT TCGTAAGGAT ACGGCTCGCA AACTGCACCG TAACGCAGTC
AGGATTCCTG ACTACCGTTT GGTGAAAAAT CCAGAAAAGT CAAAATTTTT ATCTGGTTAT
AATCTGATGC ACTGGATAAA AATTTGTGAT GATGGAAACC TGATCCTCCC TTGCCTCAAG
AACTCTGCAC CACCACACTG GGATAAGGAA CTGGGCATCA TATGGCCCAA GCAAAGGAAG
TAA
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| Protein sequence | MEKYTFWAKT YASNLPGISV LLHGRFASAV GRCLVRAMFP PQWQDLHAVV AFLLSIHDVG
KISPQFQGKC LLWLEQNGLA REAANNAWPS FTTTHACLSQ EILDYFWQQK GLLSESYSLW
SAIVGAHHGK WAKAKPHHYG QVSPPCLAPS PSVDWLREEL NFVAYQWEQH ANTELPPVTG
ASASLYASAG LLVLADWIAS DEHHFPANPT LAPIADEQID RVAHDVVGSL GFASLEIRTG
LSFEDIFGCS PYPMQVAAWC NITEPGIYVI EAPMGMGKTE AALMAAYKLM EQGKARGLYF
GLPTQATSNR IYERVLEFIL RISPTAQRVQ LIHGNSWLLD DTLAMPEQQQ LPDDSAADPK
AGSGADPLRW FCSSRRALLA PVGVGTADQA MLAALAVKHF ALRRLALLGK VVILDEVHSY
DHYTRAIIQQ LCRVLADLGS TVIILSATLS GSARSALLQS HSPVSSMGAE EDSLPYPCIS
GRAHDQDTVQ VIPCTPPPSH TVHVDFQPLQ GAISRTIDIA ASGGQVLWVC NTVANAQETF
RNIQAHAAVT DCQADMGILH ARLPFFMREE RETEWMQRLG KKGQRQRGCI LVSTQIVEQS
VDLDADVLFT ELAPTDMLLQ RMGRLWRHTR RDRPVPHPCM HIIAENFSLT DLLDMSAPAI
TKALGSKAKV YDPFILLRTL EVWGKAVSVT LPDDIRRFIY ATYTEPEFLT EALQELYDAQ
FGKSAAMKMQ AQINTDIWRL AGTDVEEYAP TRLSDHQEYG FVMYRSNVKN QITLLDGSVV
NANDKDFRKD TARKLHRNAV RIPDYRLVKN PEKSKFLSGY NLMHWIKICD DGNLILPCLK
NSAPPHWDKE LGIIWPKQRK
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