Gene Ddes_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0873 
Symbol 
ID7284549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1022359 
End bp1023276 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content53% 
IMG OID643581669 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002479458 
Protein GI220904146 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACA AAAAAAATTC TGTTGGCCAT CTGGCGGCTT TGCTTTGCAT TCTTGTCTGG 
GGTGCAACAT TCATTTCCAC CAAGGTTCTG TTGCGCGACT TCAGCCCTGT TGAAATTCTT 
TTTTTCCGGT TCAGTTTGGG TTTTGTCGCC CTGTGGCTGG CTTGTCCCCG CGCTTTGCGG 
CTGGATGATA AAAAGCAGGA ATGGCTTTTT GCAGGAGCGG GGCTTGCGGG AGTAACGCTT 
TATTTTCTGC TTGAAAATAT CGCGCTTACC TACACTTTCG CCTCTAACGT GGGCGTTATT 
GTGGCTGTGT CGCCGTTTTT CACGGCCTTG TTGTCGTTCT GGCTGCTGGC GGCCGAAAAG 
CCGGGGCTTA ACTTTTTTCT GGGCTTCACG GCAGCCATTC TGGGTATAGG GCTCATAAGC 
TTCAGCGGCA GCGCCAGCCT GCAACTCAAT CCGCTGGGAG ACCTGTTGGC TGTGCTGGCC 
GGGCTTGCTT GGTCGTTTTA TTCCATCCTT ACGCGTAAAA TTCTGGCTTT TGGCTATAAC 
AGCCTTCAGG TAACGCGCCG CTGCTTTTTT TATGGGCTGG TTTTCATGCT CCCCAGTTTG 
CCTTTTATGG AGTTCCACTG GGGGCTGGAA CGCTTTGCCC AGGTCGTGAA CTGGGGCAAC 
ATGGCCTTTC TTGGTCTTGG AGCCTCGGCC CTGTGCTTTG TGGCCTGGAC GTTTGCCATC 
AAGCGTCTGG GGGCGGTGAA AAGCAGCGTC TACATATATC TTGTTCCTGT GGTGACGGTT 
ATTACAGCCG CTCTCATACT GGATGAACGT ATCACCTGGA TGGCCGGGAT GGGAACCGTG 
CTGACGCTGG CAGGTCTGGC GCTTTCGGAG ATGCGGCAGT TTCGCCTATG GAAAAAAGCC 
GCCTCGCTGC GGCAGTGA
 
Protein sequence
MSDKKNSVGH LAALLCILVW GATFISTKVL LRDFSPVEIL FFRFSLGFVA LWLACPRALR 
LDDKKQEWLF AGAGLAGVTL YFLLENIALT YTFASNVGVI VAVSPFFTAL LSFWLLAAEK 
PGLNFFLGFT AAILGIGLIS FSGSASLQLN PLGDLLAVLA GLAWSFYSIL TRKILAFGYN 
SLQVTRRCFF YGLVFMLPSL PFMEFHWGLE RFAQVVNWGN MAFLGLGASA LCFVAWTFAI 
KRLGAVKSSV YIYLVPVVTV ITAALILDER ITWMAGMGTV LTLAGLALSE MRQFRLWKKA 
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