Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0867 |
Symbol | |
ID | 7284543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1017082 |
End bp | 1017930 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643581663 |
Product | HflC protein |
Protein accession | YP_002479452 |
Protein GI | 220904140 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00264104 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTACCA ATCCTCTGCC GGCTGTCATC GTGCTGCTGC TGATCGTTGT GGTGGGTAGC CAGTGCTTTT TTACTGTCCA TCAGACGCAA ACGGCTCTTG TGCTTCAGCT GGGTGATCCC CTGGACAGGG TGTATGGCCC CGGCCTGCAT TTCAAGATGC CTTTTATCCA GAACGTGGTG TATTTTGATT CGCGGGTGCT GGATTATGAA GCCCGCTCGC GTGAAGCCTT TACGGTAGAC AAGAAAGCCA TTGTGCTTGA CAACTACGCC CGCTGGAAAA TTATCGATCC CCTGCAATTT TACCGTACCA TGCGCACCAT ACCTGGAGCG CAGGCGCGGC TTGACGACGT TGTCTACTCC CAGCTGCGGG CGCTGGTGGG CGCATACACC CTCACCGAGG TTGTCTCCTC CCACCGTGCG GCCATCATGA AGGAAGTGAC AAACAAGGTT TCAGCCTTGA TGCATAGTTA CGGTGTTGAA GTGCTGGACG TGCGTATAAA ACGCACCGAC CTGCCGCCGG AAAACCAGCG TGCCATCTTC GGGCGCATGC GGGCGGAGCG TGAGCGCCAG GCCAAGCAGT ACCGTTCCGA AGGTGAGGAA GAATCCACGC GTATCCGTTC CGACGCTGAC CGTCAACGTG CAGTTATATT GGCTGAAGCC GCGCGCGAGG CTCAGATAAA ACGCGGTGAA GGCGACGCCA GCGCCGCATC CATCTACGCC CAATCCTATA ATAAGGCGCC TCAGTTCTAT GCGTACCAAC GCTGGCTGGA GGCCATGCGC AAATCTCTCA AGGAGAACAG CAAGATGGTG CTGGCCAACG AAGCGCCTCT TCTTAATCCT CAACATTGA
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Protein sequence | MRTNPLPAVI VLLLIVVVGS QCFFTVHQTQ TALVLQLGDP LDRVYGPGLH FKMPFIQNVV YFDSRVLDYE ARSREAFTVD KKAIVLDNYA RWKIIDPLQF YRTMRTIPGA QARLDDVVYS QLRALVGAYT LTEVVSSHRA AIMKEVTNKV SALMHSYGVE VLDVRIKRTD LPPENQRAIF GRMRAERERQ AKQYRSEGEE ESTRIRSDAD RQRAVILAEA AREAQIKRGE GDASAASIYA QSYNKAPQFY AYQRWLEAMR KSLKENSKMV LANEAPLLNP QH
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