Gene Ddes_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0861 
Symbol 
ID7284537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1008858 
End bp1009316 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content55% 
IMG OID643581657 
Productprotein TolR 
Protein accessionYP_002479446 
Protein GI220904134 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000417761 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCCA GTGTCGGCAA CGGCAACAAA TTCGTTTCGG AAATCAACGT CACGCCTTTT 
GTGGACGTCA TGCTGGTGCT GCTCATCATT TTCATGGTAG CCACCCCAAT GATGAGCCAG
GGGCTTGAGG TAGATCTGCC GCAAACCACA CAGGTGGAAG TGCTGCCCAC AGAAGCAGAC
CATATGGTGC TGACCGTGCG CAGTGACGGC AAGATATATC TGGATGAATA CGGCGTTGAC
AATATGGAAG ACCTCGAAGG CTATCTGCAG CGCCTGGTCA AAGAAAAAAA CAAAACTCTC
TTCCTCCAGG CCGATAAGGC CGTACCCTAT GGCACAGTGG TGGAAGTGAT GGGGCATATC
AAGGCCGTCG GCATAGAGAA ACTCGGTGTG ATCGCCGAAC AGCCCGACGA AGCCCCGGCC
AAGGGCGGCA AAAACGCCCC TGCCCGTGCC CCGAAGTAG
 
Protein sequence
MGASVGNGNK FVSEINVTPF VDVMLVLLII FMVATPMMSQ GLEVDLPQTT QVEVLPTEAD 
HMVLTVRSDG KIYLDEYGVD NMEDLEGYLQ RLVKEKNKTL FLQADKAVPY GTVVEVMGHI
KAVGIEKLGV IAEQPDEAPA KGGKNAPARA PK