Gene Ddes_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0804 
Symbol 
ID7284479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp940839 
End bp942023 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content62% 
IMG OID643581601 
Productaminotransferase class V 
Protein accessionYP_002479390 
Protein GI220904078 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAACA AGTTTCGCCT GCTCACCCCC GGCCCCACGC CCCTGCCCGA GCGCGTGCGC 
CTTGTTCTGG CCCGGGACAT GATCCACCAT CGCAAAAGCG AATTCAAAGA GATCATGGGG
CAGGTTCAGC AAAGCCTGCA AACACTTTTC GGCACTTCCG GCACGGTGCT GCCTCTCTCC
TGTTCCGGCA CGGGGGCCAT GACGGCAGCC GTGTACAATC TTTTCGCGCC GGGGCAAAAA
GTGCTGGTGA TCGACGGTGG CAAATTCAGC CAGCGCTGGA GTGAAATTGC CCTGTCGCGC
GGCCTGGAAG TAGAAACCAT CCCTGTGCCG TGGGGCCAGG CCGTCAGGCC TGAAGCCGTG
GAAGCGGCCC TCAAGGCGGA CCCGTCCATT GCCGGAGTGC TTATCCAGCT TTCCGAAACA
TCCACCGGTG TACTTCACCC TGTGGAGGCC GTGGCCCGCA TCACCCGCGA AAGCCAGGCC
CTGCTGGTAG TGGACGGCAT CTCGGCAGTG GGCCTTTCAC CCTGCCCCAT GGATGCATGG
GGAGTGGACT GCCTGCTCAC CGGCTCGCAA AAAGGCCTCA TGCTGCCCCC TGGCCTGGCG
CTGCTGGCGC TGTCCGGGCG GGCCTGGGCC TGTGCCGAAA AGCAGACGCC GGGCTGTTTT
TACTTCAATC TGGTCAAAGA GCGCGAGAAT GTGCTCAAGG GGCAAACCTG CTTTACTTCT
CCTGTGGGAC TTATCCTCGG ACTCAAGGAA AGCCTGGACA TGCTGCTGGA AAACGGGCTG
GAACCCGTGT ATGCCAAGCA ATGGGCCTTG ACCATGCTCA CCCGCGCAGG CCTTTCGGCC
ATGGGGCTGG AACTGTTTGC CAAAAAAGAT TTTGCGTGGG GCATCACCAG CGTACTGCTG
CCTGACGGAG TTGATGGCAC AAAGGTATTG CGTCTGGCTC AGGAAAAACA CGGCGTATGT
ATGGCCGGGG GGCAGGACCA CTACAAGGGG CGCATGGCGC GCATCGGCCA TATGGGATGG
GTGGACTGGG CGGATGTGGC CGCCGGCCTT TACGCCCTCA ACGACAGCCT GCGGGCCGTG
GGCGGCTACA GCGGCTCGCG CGACTATCTG GAGCAGGGCA TGGCCGCCTA TCGTGCAGCC
CTTGAAGGCA GGCCCGGCGC TCCGTTGCCT CAGGTCTATA GCTAG
 
Protein sequence
MLNKFRLLTP GPTPLPERVR LVLARDMIHH RKSEFKEIMG QVQQSLQTLF GTSGTVLPLS 
CSGTGAMTAA VYNLFAPGQK VLVIDGGKFS QRWSEIALSR GLEVETIPVP WGQAVRPEAV
EAALKADPSI AGVLIQLSET STGVLHPVEA VARITRESQA LLVVDGISAV GLSPCPMDAW
GVDCLLTGSQ KGLMLPPGLA LLALSGRAWA CAEKQTPGCF YFNLVKEREN VLKGQTCFTS
PVGLILGLKE SLDMLLENGL EPVYAKQWAL TMLTRAGLSA MGLELFAKKD FAWGITSVLL
PDGVDGTKVL RLAQEKHGVC MAGGQDHYKG RMARIGHMGW VDWADVAAGL YALNDSLRAV
GGYSGSRDYL EQGMAAYRAA LEGRPGAPLP QVYS