Gene Ddes_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0686 
Symbol 
ID7284359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp814206 
End bp815249 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content56% 
IMG OID643581481 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_002479272 
Protein GI220903960 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATCA AACAGGGCGA ACGCCTTATC AATGCGCGCA ATTGGTCCGA GCTTGTCAAG 
CCCGACCAGA TTTTGCGCGA AGAAGAGACG GCCAGCGGCA CGCACGGCAA GTTTGTCTGC 
GAGCCTTTGG AGCGGGGCTA CGGCACCACC ATCGGCAATG CCATGCGGCG CGTCCTTCTG 
GCCTCCCTTC AGGGGGCGGC CTTTGTGTCG GTGAAAATCA TCGGCGTACA GCACGAGTTC 
ACCACCATCC ATGGCGTGCT GGAAGACATC ACTGATGTCA TCCTGAACAT CAAGCAGGTT 
CGCCTGCGCA TGGATACGGA AGAACCCCAG CGTCTGACCC TGCGCGTTGA GCGCAAGGGA 
CCGGTGACGG CGGCCGACAT TGTGGCCAAT CAGCACGTTG AAGTGCTTAA CCCTGATCTG 
CACATCGCCA CTCTTACCGA AGACGTGGTG CTGGAGATGG AGTTGGAGGT CCGCATGGGC 
AAGGGCTATG TGCCCGCCGA CATGCACGAG GGCCTGGCCG ATGAAATCGG CCTCATCAAG 
CTGGATTCCA GCTTTTCCCC GGTGCGCAAG GTCGCCTATA CGGTGGAACA GGCCCGCGTG 
GGCCAGATGA CCAACTATGA CCGTCTTCTG CTTGAAGTGT GGACCGACGG CTCGCTGACG 
CCTGAAGATG CCATTGCTTA CAGCGCCAAG ATCATCAAGG ATCAGATATC CGTATTCATC 
AACTTTGATG AACGTGTATC CGGCGACATG CGCAACGGCA GCGGCGAAAG CGGAGAAGTG 
AACGAACATC TGTTCAAAAG CATTGACGAT CTTGAGCTTT CCGTTCGTGC CACCAACTGC 
CTGCGCAGCG CCAATATCGG CCTTGTGGGT GAACTGGTGC AGCGTACTGA AGCCGAGATG 
CTCAAGACCA AGAATTTCGG CCGCAAATCG CTGGACGAAA TTAAGGGTGT GCTTTTGGGC 
ATGGGGCTTG ACTTCGGCAT GAAGGTCGAC TCCTTCGACA AAAAATATCA GGAATGGAAA 
AGGAAGCAGC AAAATGAGGC ATAG
 
Protein sequence
MLIKQGERLI NARNWSELVK PDQILREEET ASGTHGKFVC EPLERGYGTT IGNAMRRVLL 
ASLQGAAFVS VKIIGVQHEF TTIHGVLEDI TDVILNIKQV RLRMDTEEPQ RLTLRVERKG 
PVTAADIVAN QHVEVLNPDL HIATLTEDVV LEMELEVRMG KGYVPADMHE GLADEIGLIK 
LDSSFSPVRK VAYTVEQARV GQMTNYDRLL LEVWTDGSLT PEDAIAYSAK IIKDQISVFI 
NFDERVSGDM RNGSGESGEV NEHLFKSIDD LELSVRATNC LRSANIGLVG ELVQRTEAEM 
LKTKNFGRKS LDEIKGVLLG MGLDFGMKVD SFDKKYQEWK RKQQNEA