Gene Ddes_0677 details

Gene Information

• Locus tag: Ddes_0677
• Symbol: rpsE
• ID: 7284350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
• Kingdom: Bacteria
• Replicon accession: NC_011883
• Strand: +
• Start bp: 808849
• End bp: 809361
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643581472
• Product: 30S ribosomal protein S5
• Protein accession: YP_002479263
• Protein GI: 220903951
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.780274
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCAGG AAAATACCGA AACACAGCAG AACGAGTTGG GCGAAATCGA AAAGATCGTT 
TCCCTCAACC GCGTGGCCAA GGTGGTCAAG GGCGGACGCC GGTTCAGCTT CAGCGCTCTT 
GTGGTGGTGG GTGACGGAAA GGGCGGCGTG GGCTTTGGCC TGGGCAAGGC CCAGGAAGTG 
CCCGAAGCCC TGCGTAAGGC GACAGAGCGC GCCCGCAAGA ACCGCGTTCA GGTGGCTCTT 
GTGGACGGCA CCCTGCCTTA TGAAATTCTG GGCCGCTTCG GCGCCGGACG CGTCATGCTC 
AAGCCTGCCT CCGAAGGTAC CGGCATCATC GCCGGCGGCG CTGTGCGCGC CATCATGGAA 
GCTGCCGGCG TGCGCGACGT GCTGACCAAG GCCATTGGCA CCAATAATCC GCACAACGTG 
CTTCGCGCCA CCATGCAGGG CCTTACCGCC CTGCGCAGCG CCGATGACGT GTCGGCTTTG 
CGCGGCAAGA AGCTGGAAGC TCCGAGGAAG TAG 

 

Protein sequence

MRQENTETQQ NELGEIEKIV SLNRVAKVVK GGRRFSFSAL VVVGDGKGGV GFGLGKAQEV 
PEALRKATER ARKNRVQVAL VDGTLPYEIL GRFGAGRVML KPASEGTGII AGGAVRAIME 
AAGVRDVLTK AIGTNNPHNV LRATMQGLTA LRSADDVSAL RGKKLEAPRK