Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0613 |
Symbol | |
ID | 7284285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 741710 |
End bp | 742945 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643581408 |
Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
Protein accession | YP_002479200 |
Protein GI | 220903888 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000287642 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAAA TGTCGTTCGA ACTCTTCGTG GCCTTGCGCT ATTTGTTTTC AAGACGCAAG CAGACCTTCA TCTACATCAT ATCGCTCATG TCCATTCTGG GCGTGGCACT CGGCGTTGGC GCGCTGGTGG TGGTGCTTGG CGTGTACAAC GGCATGACCA CCGATATGCG GGACAAGATC CTCGGCGCCA ATTCACACGC CATAGTCATG TCCTATCTGC CCTCAGCCTT TGAAAACGAT GACGGCCTGC TGGAGCGCAT CCGTTCCATC AAGGGCGTCA CCGGGGCCAC CCCCTTTGTC TATACCGAGG TGATGCTTTC AACTGCCAAC GGCGTAAAGG GCGTGGTGCT GCGCGGCATT GACCCTGAAT CCGGGCCGCG TGTGCTCTCC ATGCTGCGCC AGATGCGTTC CGGTTCTGCT GCCGACCTGC AAAAAGAAGG AGCGCCCGGC CTTATCATCG GTGAAGAACT GGCCAAGCGC CTTGGCCTTG CGGTGGGCAG CCGGGTGAAC CTGCTCTCCC CGTCCGGGCA GAAGACCGCA TCGGGCTACG CGCCGCGCAT CCGCCCCTTC GAGGTGGTGG GCGTCTTCAA GACAGGCATG TTTGAATACG ACTCGTCCCT GGCGTTCGTG CATCTTTCCG CAGCCCGCGA TGTGCTCGGC CTGCCCGAAA AATATCTTTC GGGCGTGGAA CTCACCGTGA ACGACCTCTT CAAGGCCGAT CAGATATCCA GCCGCGTAGC CACCGAACTG GGATCGCCCT TTTATGTGCG CTCGTGGATG GAAATGAACG CCAACCTCTT TGCAGCCCTC AAGCTGGAAA AGATAGGCAT GTTCATCCTG CTGACCATGG TGGTGCTTAT TGGTTCTTTC TCCATTGTGA CGTCTCTTGT CATGCTGGTG ATGGAAAAAA CACGCGACAT CGCCATCATG ATGTCCATGG GGGCCACACG CGGCATGATA CGCCGCATCT TCATGTTCCA GGGCAGCATC ATCGGCGTTA TCGGTACGCT GCTGGGCTAT GTGCTCGGCC TTACAGTGGG CTGGCTGCTC AAGCGCTACC AGTTCATCAA GCTGCCTGAA AACGTGTATA CTCTCGACCA CCTGCCCATC AGCATCACCC TCAGCGATGT GCTCATCGTG GGGGCCAGCG CCATGCTGCT GTGCTTTCTG GCCACACTTT ACCCGGCCCG CCAGGCGGCC CGCCTTGAAC CGGCGGAAGC CCTGCGCTAC GAGTAG
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Protein sequence | MPQMSFELFV ALRYLFSRRK QTFIYIISLM SILGVALGVG ALVVVLGVYN GMTTDMRDKI LGANSHAIVM SYLPSAFEND DGLLERIRSI KGVTGATPFV YTEVMLSTAN GVKGVVLRGI DPESGPRVLS MLRQMRSGSA ADLQKEGAPG LIIGEELAKR LGLAVGSRVN LLSPSGQKTA SGYAPRIRPF EVVGVFKTGM FEYDSSLAFV HLSAARDVLG LPEKYLSGVE LTVNDLFKAD QISSRVATEL GSPFYVRSWM EMNANLFAAL KLEKIGMFIL LTMVVLIGSF SIVTSLVMLV MEKTRDIAIM MSMGATRGMI RRIFMFQGSI IGVIGTLLGY VLGLTVGWLL KRYQFIKLPE NVYTLDHLPI SITLSDVLIV GASAMLLCFL ATLYPARQAA RLEPAEALRY E
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