Gene Ddes_0462 details

Gene Information

• Locus tag: Ddes_0462
• ID: 7284127
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
• Kingdom: Bacteria
• Replicon accession: NC_011883
• Strand: +
• Start bp: 558343
• End bp: 560169
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643581253
• Product: GTP-binding protein TypA
• Protein accession: YP_002479052
• Protein GI: 220903740
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTATA ACGATTCTCT TCGCAACGTT GCTATTATCG CCCACGTTGA CCACGGCAAG 
ACCACTCTGG TGGACGCGCT CTTCAAGCAG GGCGGCGGCC TTCGCGCCGG CCAGCAGATG 
GACGACCGCG TCATGGACAA TATGGACATT GAACGCGAGC GCGGCATCAC CATTGCCGCC 
AAAAACTGTG CCGTTTCGTG GAACGGCGTC AAGATCAATA TCATCGACAC CCCGGGCCAC 
GCGGACTTCG GCGGTGAGGT GGAACGCTCG CTTTCAATGA CCACAGGGGC CATTCTGCTG 
GTGGACTCTT CTGAAGGTCC CCTGCCGCAA ACCCGTTTTG TGTTGCGCAA AACGCTGGAA 
GCCGGGCTGC CTGTGGTGGT GGTCATCAAC AAGATCGACC GCAAGGACGC ACGGCCCGAA 
GAAGTGCTGA ACGAGATCTA CGATCTTTTT ATCGACCTGG ACGCCAGCGA GGCGCAGCTC 
GAGTTTCCCG TGCTCTACGC CATCGGCCGT CAGGGTGTGG CCATGAAAAA TATTGACGAC 
GAGCAGAAGG ATCTGACCCC TCTGTTTGAA GCCATACTGA AGCATATTCC CGGTCCGGCG 
CACGATCCCG GGCAGCCCTT CCAGATGCTG GTGGCTGACC TTGACTATTC CGACTATCTG 
GGCCGCCTGG CTGTGGGCCG CATCATGCAC GGGCATGTGC ACAGCAAGGA AACCCTCGCC 
TGCATCGGCG AAAACGGAAA ACCGCGCGCT CTGCGGGCCA CCAAGCTTCA GGTGTATGAC 
GGCCTGAAGC TTGCCGAGGT AGAAACCGCC GCCCCCGGCG ATATTGTAGT GCTGGCAGGC 
ATTGAAGACG TGACCATCGG CGACACTATC TGCACCAGCA CCAATCCCCG CGCCCTGCCG 
CGCATCAGGG TGGATGAGCC GACGGTGGCC ATGCGTTTCG GCATCAACAC TTCGCCCCTG 
GCCGGACGCG AGGGCAAGAT TGTGCAGAGC CGCGCCATTC GCGACCGCCT GGAAAAGGAA 
ACCCTGCGCA ACGTGGCTGT GCGCGTGGAA GACACCGCCG ACCGCGATGC TTTTCTGGTC 
AAGGGGCGCG GCGAATTTCA GATGGCTATT CTTATCGAGA CCATGCGGCG CGAAGGTTTT 
GAACTTTCCG TGGGCCGCCC CGAGGTAATC CTGCGCAAGG ATGAGGACGG CAAGGTTCTT 
GAACCCATTG AGCGCCTTTA TGTGGACTGC GACGAAGTCT TCATGGGGGT GGTTACGGAA 
AAGCTGGCCC AGCGCAAAGG GCGCATGCTC AACTGCGTCA ACAACGGCAC GGGCCGGGTG 
CGCCTTGAGT TCACGGTGCC TTCGCGCGGT CTTATCGGGT ATCGGGATGA ATTTCTTACG 
GATACCAAGG GTACGGGCAT CATGAACTCG TATCTTGAAG GCTATGAAGA ATGGCGTGGT 
GATTTTCCCA CGCGTTTTTC CGGCTCCATT GTGGCCGACA GGTCGGGCAG CGCCGTGGCG 
TATGCCCTTT TTAACCTTGA GCCGCGCGGC GTGCTTTTTG TGGAGCCGGG CAATCCCGTG 
TACGAAGGCA TGATCGTGGG TGAGCACAAT CGCGACAATG ATATTGACGT GAACGCTACC 
AAGGAAAAGA AGCTCACCAA CATGCGCGCG GCGGGCAAGG ATGAAAACGT CATCCTGACG 
CCTGTGCGCC GCATGACGCT GGAACACGCC CTGCACTTTG TGCGTGAAGA TGAACTGGTG 
GAAGTGACGC CCCAGTCCAT CCGTCTGCGC AAAGCGGAGC TTTCAGCCCA GAAGCGCTAC 
CAGATCGCGG GCAGGCGCAA GGGATAA 

 

Protein sequence

MHYNDSLRNV AIIAHVDHGK TTLVDALFKQ GGGLRAGQQM DDRVMDNMDI ERERGITIAA 
KNCAVSWNGV KINIIDTPGH ADFGGEVERS LSMTTGAILL VDSSEGPLPQ TRFVLRKTLE 
AGLPVVVVIN KIDRKDARPE EVLNEIYDLF IDLDASEAQL EFPVLYAIGR QGVAMKNIDD 
EQKDLTPLFE AILKHIPGPA HDPGQPFQML VADLDYSDYL GRLAVGRIMH GHVHSKETLA 
CIGENGKPRA LRATKLQVYD GLKLAEVETA APGDIVVLAG IEDVTIGDTI CTSTNPRALP 
RIRVDEPTVA MRFGINTSPL AGREGKIVQS RAIRDRLEKE TLRNVAVRVE DTADRDAFLV 
KGRGEFQMAI LIETMRREGF ELSVGRPEVI LRKDEDGKVL EPIERLYVDC DEVFMGVVTE 
KLAQRKGRML NCVNNGTGRV RLEFTVPSRG LIGYRDEFLT DTKGTGIMNS YLEGYEEWRG 
DFPTRFSGSI VADRSGSAVA YALFNLEPRG VLFVEPGNPV YEGMIVGEHN RDNDIDVNAT 
KEKKLTNMRA AGKDENVILT PVRRMTLEHA LHFVREDELV EVTPQSIRLR KAELSAQKRY 
QIAGRRKG