Gene Ddes_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0352 
Symbol 
ID7284009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp430796 
End bp431992 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content58% 
IMG OID643581137 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_002478944 
Protein GI220903632 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA TTGACCGCCA AATGGCTACC ATCAAGCGCG GCGTGGCCGA ACTGATCGAC 
GAAAACGAAC TGCGCAAGAA GATCCTGCGC GGCGCTCCCC TGCGCATCAA AGTGGGCTTT
GACCCCACCG CCCCCGACCT GCATCTGGGA CATACGGTAG TCATGCACAA GATGCGTCAC
TTTCAGGAAC TGGGCCACCA TGTAGTCTTT CTTATCGGCG ATTTCACCGG GCGCATCGGT
GACCCTTCGG GCCGTTCTGA AACCCGCCCC CCGCTCACTG AAGAGCAGGT GCTCGCCAAT
GCCGAGACCT ACAAAAAACA GGTCTTCAAA ATCCTTGACC CCGCCAAGAC CGAAGTGGCC
TTCAACTCCG CATGGCTCGG CAAGCTCGAC GCCACCGGCT TTATCAAGCT TGCATCCAGC
TATACCGTCG CCCGTATGAT GGAGCGCGAC GATTTCGAAA AGCGCTTCCG CGAGCAACGG
CCCATTTCGA TCCACGAATT TCTCTATCCC CTCTGCCAGG GGTATGACTC CGTATGCCTC
AAGACCGATG TGGAGATGGG CGGCACCGAC CAGAAGTTCA ACCTGCTGGT CGGCCGCAAT
CTTCAGGCCC ACTACGGCAT CGAAAGCCAG TGCATTCTCA CCATGCCCCT GCTTGAAGGC
ACTGACGGCG TACGCAAGAT GTCAAAATCT TACGGCAACT ATATCGGCAT TGACGAAGCG
CCTTCCGAGA TTTTCGGCAA GATCATGGCC ATTTCCGACG ACCTCATGTG GCGCTACTAC
GAACTGCTTT CAACCAAAAG CCTGGAAGAT ATCGCCACCC TCAAGACGGA TGTGGCCACC
GGCACGGTGC ACCCCAAAGC CGCCAAGGAA ACGCTGGCCC ACGAAATGGT CAGCCGTTAC
CACAGCCGGA AAGACGCCGA CGAAGCCCAG CAGGGCTTTA ATGCGGTCTT TGCGGATGGC
GGCGTACCTG ACGAAATGCC CGAGCACCAG TGCGCGCACG GCGAAGACAG CACCCCTCCG
GTCTTTCTTG AAGCCGCGGG CCTGGTCAAA AGCCGCGGTG AGGCCAAACG CCTCATGAAG
GAAGGAGCAC TCTCCATCGA CGGGCAACGC TGCGACGACG CCATAACGCC CCTGTCCGCC
GGGGAATATG TGATCAAACT GGGCAAAAAG CGCTTTTTGA AGCTGCTGGT CAGCTAA
 
Protein sequence
MTDIDRQMAT IKRGVAELID ENELRKKILR GAPLRIKVGF DPTAPDLHLG HTVVMHKMRH 
FQELGHHVVF LIGDFTGRIG DPSGRSETRP PLTEEQVLAN AETYKKQVFK ILDPAKTEVA
FNSAWLGKLD ATGFIKLASS YTVARMMERD DFEKRFREQR PISIHEFLYP LCQGYDSVCL
KTDVEMGGTD QKFNLLVGRN LQAHYGIESQ CILTMPLLEG TDGVRKMSKS YGNYIGIDEA
PSEIFGKIMA ISDDLMWRYY ELLSTKSLED IATLKTDVAT GTVHPKAAKE TLAHEMVSRY
HSRKDADEAQ QGFNAVFADG GVPDEMPEHQ CAHGEDSTPP VFLEAAGLVK SRGEAKRLMK
EGALSIDGQR CDDAITPLSA GEYVIKLGKK RFLKLLVS