| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0308 |
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| Symbol | |
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| ID | 7283964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 376040 |
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| End bp | 379243 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643581093 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002478901 |
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| Protein GI | 220903589 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTTT CCACAAAGCC GAATTTCTTT TTACGCAGAC CAATTCTTTC GGCGGTCATA
TCCATTGTCA TCACTCTGGT GGGGGCGCTG GCCATGCGGG CATTGCCCGT GGCCCAGTAC
CCCGACCTGG TGCCTCCCAC GGTCAACGTC AGCGTGGTGT ATCCCGGTGC TTCCGCGGAG
ACCATCGCGT CTACCGTGCT GGCCCCTCTG GAAGTCAATA TCAACGGCGT GGAAAACATG
CTCTACATGA CTTCCACGGC GGCTTCCGGC TCTGGCTCGG GCAGCATCAA CGTCTACTTT
TCGTTGGGTA CAGACCCGGA TATGGCCCTT GTCAACGTCA ACAACAAGGT CAACCTGGCC
CAGACGGTGC TGCCCGAAGC GGTGCGCCGC CAGGGCGTAA GCGTGCTCAA GCGTTCGCCG
GCCATGCTGC TGGTGTTTTC GTATTTTTCG CCTGATGGCC GTTACGACCA GGTGTTCATC
AACAACTGGG CGCAGATTAA CGTGGTGGAC GCGCTCAAGC GCGTGGAAGG CGTGGGTGAC
GTAACCATAT TCGGCAGCAT GGACTACGCC ATGCGCATCT GGTTGCAGCC CGACAAGCTG
GCGAAGTATG GCGTGTCCGT CAATGAAGTT GCCGCCGCCA TTCAGGAGCA GAACTCGCAG
TACGCTCCCG GACGCCTGGG CGAAATGCCC TCACCAGATT CCACACAGCT TACCTGGCAG
ATCGACACCC AGGGCCGTCT GGTCACGCCG GAAGAATTCG GCGAGATCAT CGTGCGCAGC
GGGCCTGACA GCGCCATGCT GCGCCTCAAG GATGTGGCCC GTGTGGAGCT GGGCGGCAAG
GACTACAGCG TCACCTCGCG CTATAACGGC ATGGTGGCGC GTATGGGCGC CGTCTATCTG
CTGCCCGGGG CCAACGCCAT CGCCACCGGC GACCGTGTGC TGGACAAGCT GGCCGAAATC
GGCCTGACCA TGCCTGACGG GCTTGATTAC ACCATTCTTG TGAACACCAA CGACTTCGTG
CTTGAATCCA TCCGCGAAGT GGTCTCCACC CTGGTGGAAG CCATGATACT GGTGTTCATC
GTTGTGTATG TGTTTCTGCA AAGCTGGCGC GCCACCATCA TTCCCTGCGT GGCTGTGCCG
GTCTCCATTA TCGGTACGTT CGCCGGGCTG TACGCCTTTG GCTATACCAT CAATACTCTT
ACGCTTTTTG CCATGGTGCT TTCCATCGGC ATCGTGGTGG ACGACGCCAT CGTGGTGCTG
GAAAACGTGG AGCGCATCAT GACCACGGAG CACCTGCCGC CCAAGGAGGC CACGGCCAAG
GCCATGAACG AGGTCACGGC CCCCATTGTG GCCATTGTGC TCGTGCTGTG CGCCGTGTTT
ATTCCCGTAT CCTTTATGGG CGGCCTGGCA GGGCAGATGT ACAAGCAGTT CGCCATCACC
ATTTCGGTGT CGGTGGTTCT GTCGGGCGTG GTGGCGCTGA CGCTCACCCC CGCCCTCTGC
GCCCTGCTGC TCAAGCCCCA CGACCACAGC TACAAACCGC CCAAACCCTT TGCGTGGTTC
AACAGGTTCT TTGACAGCGT AACTACAAAC TATGTGAACA TCGTTAACTA CCTCAAGGCT
TCCAGCCTGC GGGCCTTGTC GCTGTTTGCC GTCATGATCC TCATTTGCGT GTGGCTGTTC
AGGGTCGTCC CCGGCGGCCT CGTGCCCAAC GAAGACCAGG GGTATATCCT GGGTATGGCC
ATTCTGGACG ACGGTGCCTC GCAGCACCGC ACAACGGCCG TCAACAAGGT TCTCAACGAC
TTTCTGCTCA GCAACCCCGC TGTGCAGAGC ATGGGTACCC TGTCCGGTCT GGACATCACG
TCCATTTCGG TCAAGAGCAA CTACGGCACC TTCTTTGCCC TGCTCAAGCC CTGGGGTGAA
CGTAAAAAAA CCGAAATGTC GTCAGACGCC GTGTTGCAGA CTGTGGGCGC GGTTACGCTC
ATGCAGCCCG AAGCAGTGGT TATGGGCTTT GCACCGCCGC CCATCAGCGG CATGAGCACC
ACGGGCGGCT TTGAAGGTTA CATTCAGATG CGCGGCACCG GCAGCCTTCA GGACCTGGAA
AATGAGACCA ACCGTCTTGT ACAGGAAGTT ATGGCTGTGG ATGCCGACGG CAAACGCAAA
TATCCGGCCA TCGGCATGCT GCGTAACCTG TTTTCCACCG GTTCTCCCCA GTTGTACGCC
AACCTCGACC GTGATCGCTG CAAGGATATG GGTGTTCAGA TCAGCGACGT GTTTACGGCT
ATGGGCGGCA CCTTTGGCGG CGCGTACGTG AACGACTTCA ACTATATGGG CCGTACCTTC
CAGGTTCGTC TGCAGTCCGA GGCCCAGTAC AGGGTTCTGC CCGAAGACCT GGGCAACGTG
TACGTGCCCA ACAACAAGGG CGAGATGATC CCGCTGACCG CCGTCATGAC CCTTGAACGT
CGCACCGCCC CCCAGGTGGT GGAACGCTAC AACGTCTTTC CTGCGGCCCA CGTTATGGGT
GCTCCCGCCC CGGGCTTTTC ATCGGGGCAG GCTCTGGACC AGATGGAAGC CGCAGCCAAG
GCCATTCTGC CCACAGACTA CAGTCTGGGC TGGGTTGGTT CAGCCCTTCA GGAAAAGCTC
GCCAGTACGG ACACCACGGT GATCTTTGTT CTGGCTCTGG TCATGGTCTT CCTGATTCTG
GCGGCGCAGT ACGAGTCGTG GTCCCTGCCG CTTTCGGTGC TCACGGCCGT GCCCTTCGGC
GTGTTCGGCG CTTTGCTGGC AACCTGGGCG CGCGGCCTTT CCAATGACGT GTACTTTCAG
GTGGCTCTGG TCACACTGGT GGGTCTGGCA GCCAAAAATG CCATCCTTAT CGTGGAATTC
GCGGTAGAGG CGTGGCGCGG CGGCCGTAGC CTTGACGCGG CGGCGAGCTT TGCCTCGCGG
CTGCGCTTCA GGCCCATTGT CATGACCTCT CTGGCTTTTA TTCTTGGCTG CGTGCCTTTG
GCAATCAGCA CAGGCGCGGG CGCCAACAGC CGCCACGCCC TGGGTACGGC GGTCATTGGC
GGTATGCTGG CGGCCACGTG CATAGCCACG CTTTTTGTGC CGTATTTCTT TAAGATAATC
ATGCAGATAT CACTGAAAAT ACAGGGCAAG ACAGATCCCA ACGCCGGTAA GGACTTTACC
GGGGATGGAC AGGAGGATCT ATGA
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| Protein sequence | MAVSTKPNFF LRRPILSAVI SIVITLVGAL AMRALPVAQY PDLVPPTVNV SVVYPGASAE
TIASTVLAPL EVNINGVENM LYMTSTAASG SGSGSINVYF SLGTDPDMAL VNVNNKVNLA
QTVLPEAVRR QGVSVLKRSP AMLLVFSYFS PDGRYDQVFI NNWAQINVVD ALKRVEGVGD
VTIFGSMDYA MRIWLQPDKL AKYGVSVNEV AAAIQEQNSQ YAPGRLGEMP SPDSTQLTWQ
IDTQGRLVTP EEFGEIIVRS GPDSAMLRLK DVARVELGGK DYSVTSRYNG MVARMGAVYL
LPGANAIATG DRVLDKLAEI GLTMPDGLDY TILVNTNDFV LESIREVVST LVEAMILVFI
VVYVFLQSWR ATIIPCVAVP VSIIGTFAGL YAFGYTINTL TLFAMVLSIG IVVDDAIVVL
ENVERIMTTE HLPPKEATAK AMNEVTAPIV AIVLVLCAVF IPVSFMGGLA GQMYKQFAIT
ISVSVVLSGV VALTLTPALC ALLLKPHDHS YKPPKPFAWF NRFFDSVTTN YVNIVNYLKA
SSLRALSLFA VMILICVWLF RVVPGGLVPN EDQGYILGMA ILDDGASQHR TTAVNKVLND
FLLSNPAVQS MGTLSGLDIT SISVKSNYGT FFALLKPWGE RKKTEMSSDA VLQTVGAVTL
MQPEAVVMGF APPPISGMST TGGFEGYIQM RGTGSLQDLE NETNRLVQEV MAVDADGKRK
YPAIGMLRNL FSTGSPQLYA NLDRDRCKDM GVQISDVFTA MGGTFGGAYV NDFNYMGRTF
QVRLQSEAQY RVLPEDLGNV YVPNNKGEMI PLTAVMTLER RTAPQVVERY NVFPAAHVMG
APAPGFSSGQ ALDQMEAAAK AILPTDYSLG WVGSALQEKL ASTDTTVIFV LALVMVFLIL
AAQYESWSLP LSVLTAVPFG VFGALLATWA RGLSNDVYFQ VALVTLVGLA AKNAILIVEF
AVEAWRGGRS LDAAASFASR LRFRPIVMTS LAFILGCVPL AISTGAGANS RHALGTAVIG
GMLAATCIAT LFVPYFFKII MQISLKIQGK TDPNAGKDFT GDGQEDL
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