| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0304 |
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| Symbol | |
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| ID | 7283960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 370412 |
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| End bp | 372658 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643581089 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002478897 |
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| Protein GI | 220903585 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000372801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAAC AGTTGATAAT AGTGGAATCA CCGGCCAAGG TTAAGACCAT CAAGAAATTT
CTGGGACCGG CTTATATGGT GCAGGCCAGT GTGGGCCATG TACGCGACTT GCCCGCCAAA
ACGCTTGGCG TGGACGAAGA GCATGACTTT GCGCCTCATT ATGAAGTTAT AGAAAATAAA
AAAAATGTGG TCAGCGACCT GCGCGCCGCC GCATCCAAGG CCGAGACCGT ATATCTGGCC
CCAGACCCCG ACCGCGAAGG TGAGGCCATT GCCTGGCATG TGGCCGAGCT GATCCGCGAC
AAGGCCAAGG ATATCAAGCG TATCCAGTTC AACGAAATTA CGGCCAAGGC CGTCAAGGAA
GCGTTAGCGC ACCCGCGCGA ACTCAATGCC GACCTTTTTG ACGCCCAGCA GGCCCGCCGT
ATCCTGGACA GGCTTGTGGG CTACAAGATT TCACCCCTGC TATGGAAAAC CATCAAGCGC
GGTATATCCG CAGGCCGTGT ACAATCCGTG GCCCTGCGCC TTATTGTGGA GCGTGAGGAA
GAGCGTGAGG TCTTCAGGCC AGAGGAATAC TGGCTGTTCA AGGCCCTGCT TTCGGGCGAG
GTGCCGCCTC CATTTAAGGC CGATCTGCTC AAGGTCAACG GCAAGAAGGC GGTCATCGGC
AATGCCGAAG AGGCGCAGGC TCTTGAGGCC GCCCTCAAGG GACAGCCCTT TGTGGTGGAA
AATGTGGAAC AGAAGGAGCG CGAGCGCGCG CCCCAGCCGC CGTTCATCAC CTCCACGCTC
CAGCAGGCGG CCAACCAGCG TCTTTCCTAT TCGGCCAAGC GCACTATGAA TATTGCCCAG
CGCCTCTATG AAGGCGTGGA GCTGGGCGAC CGCGGCCTTA CCGCCCTTAT CACCTATATG
CGTACGGACT CCACGCGCAT TGCCGATGAG GCCCGGGACG CGGCCAAGAA ATTTATTGGC
GAACACTTCG GCAAGGATTA CCTGCCCAAG CGCGCCCGTG TGTACAAGAC CAAGGGCAGC
GCCCAGGACG CCCACGAAGC CATCCGCCCC GTGGATGTGT CCATCACGCC CGATGAGGTC
AAGCAACACC TGCCCCCTGA CCAGTACAAT CTTTACCGGC TTATCTGGTC GCGCTTTGTG
GCTTCGCAGA TGGCCGGAGC GCGCTTTCAC GACACCACTG TCACCATTGC CTGTGCTCAC
AGCCAGTGGC GCGCCAAGGG CGAACGTCTG CTTTTCCCCG GTTTTATGGC GGCCCTGCCC
CGCGCCGGAG AAGACGCCGA TTCCGATCTG CCGCCTGTGG AGGTCGGGCA GACCCTCAAG
CTGGAAAAGA TGGACAAGGA ACAAAAGTTC ACCCAGCCTC CGCCGCGCTA CAGCGAGGCG
AGCCTCGTGC GCGAGCTTGA AGAGCGCGGC ATCGGGCGTC CTTCCACCTA TGCGGCCATT
ATATCCACAT TGCAGGACAG GGAATATGTG AGCCTGGCCG AAAGGCACTT TGTGCCTACA
GATCTCGGGC GTGTGGTTTG CGGCCAACTG ACCGAACATT TTTCGCGGTT GATGGACGTG
GGCTTTACCG CCCAGATGGA AGAAGGGCTG GACAAGGTGG CCGAGGGCAA GGAGCACTGG
GTAGAGCTTT TGCGTGCCTT TGCCGACGAT TTCAATCCTA CCCTTACGGC CGCTGCCAAA
AACATGCAGA GCGTCAAGGG CGGCATCCCC GCCGATCTAG CCTGCCCGGA ATGCGGCAAG
CCGCTCATGA TCAAGTTCGG CAAGGCCGGC GCTTTTCTGG CCTGCTCCGG CTACCCCGAC
TGCAATTTCA CCAGCAACTT CTCCCGTAAC GAGGAGGGCA AGGTGGAGGC CGTGGCCGCT
GAAAAGCCGA AGTATGAAAA GGTGGGGCAG TGCCCCAAGT GCGGGCGCGA CCTTGTCATC
AAAAAAGCCC GCACAGGCAG CAGCTTTATC GCCTGCACGG GCTATCCCGA ATGCAGGCAT
GCGGCCCCCC TGTCCACGGG CGTGCCCTGT CCGCGCTGCG AAAAGGGGCA GCTGGTGGAA
AAAAGCACCA AGCGTGGCAA GATATTCTAT TCTTGCGACC AGTACCCGCA GTGCGACTTT
GCCCTGTGGG ACAGGCCCGT ACCCGGCCCC TGCCCGCGCT GTAACTCCCC TTATCTGGTG
GAAAAGAAGA GCCGGGACGG CCTGAAGGTC ATATGCCCGG TCAAGGGCTG CGGCTATGTG
AAGGAGGAAG ATCATGAGCA GGAGTGA
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| Protein sequence | MGKQLIIVES PAKVKTIKKF LGPAYMVQAS VGHVRDLPAK TLGVDEEHDF APHYEVIENK
KNVVSDLRAA ASKAETVYLA PDPDREGEAI AWHVAELIRD KAKDIKRIQF NEITAKAVKE
ALAHPRELNA DLFDAQQARR ILDRLVGYKI SPLLWKTIKR GISAGRVQSV ALRLIVEREE
EREVFRPEEY WLFKALLSGE VPPPFKADLL KVNGKKAVIG NAEEAQALEA ALKGQPFVVE
NVEQKERERA PQPPFITSTL QQAANQRLSY SAKRTMNIAQ RLYEGVELGD RGLTALITYM
RTDSTRIADE ARDAAKKFIG EHFGKDYLPK RARVYKTKGS AQDAHEAIRP VDVSITPDEV
KQHLPPDQYN LYRLIWSRFV ASQMAGARFH DTTVTIACAH SQWRAKGERL LFPGFMAALP
RAGEDADSDL PPVEVGQTLK LEKMDKEQKF TQPPPRYSEA SLVRELEERG IGRPSTYAAI
ISTLQDREYV SLAERHFVPT DLGRVVCGQL TEHFSRLMDV GFTAQMEEGL DKVAEGKEHW
VELLRAFADD FNPTLTAAAK NMQSVKGGIP ADLACPECGK PLMIKFGKAG AFLACSGYPD
CNFTSNFSRN EEGKVEAVAA EKPKYEKVGQ CPKCGRDLVI KKARTGSSFI ACTGYPECRH
AAPLSTGVPC PRCEKGQLVE KSTKRGKIFY SCDQYPQCDF ALWDRPVPGP CPRCNSPYLV
EKKSRDGLKV ICPVKGCGYV KEEDHEQE
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